CF417530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTIL 281 +FGGVD Y G+ + PVT++ YWQ + + LI G+ +G+CS GC AI D+GTSLL P ++ A GA QE D+YG+ ++ Sbjct: 226 IFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSAFLEATGA-----QE-----DEYGQFLV 308
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQP 308 V GGVD Y G+ + PVT++ YWQ + + LI E +G+CS GC AI D+GTSLL P ++ + A GA QE ++YG+ +++ E+ P Sbjct: 226 VLGGVDSSLYTGDIYWAPVTRELYWQIGIDEFLISSEASGWCSQGCQAIVDTGTSLLTVPQEYMSDLLEATGA-----QE-----NEYGEFLVDCDSTESLP 317
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG D +Y GE +Y+ VT+K YWQ M + + E T C GC AI D+GTSLL GP + ++ AIGA +I E Sbjct: 244 MLGGTDSKYYHGELSYLNVTRKAYWQVHMDQLEVGNELT-LCKGGCEAIVDTGTSLLVGPVEEVKELQKAIGAVPLIQGE 322
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG D +Y GE +Y+ VT+K YWQ M + + E T C GC AI D+GTSLL GP + ++ AIGA +I E Sbjct: 241 MLGGTDSRYYHGELSYLNVTRKAYWQVHMDQLEVGSELT-LCKGGCEAIVDTGTSLLVGPVDEVKELQKAIGAVPLIQGE 319
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11 Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 3 Query: 9 GGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS----GVISQECKTL 254 G +DP +Y G +VPVT + YWQF + V I G C GC AI D+GTS L GP++ I I AIGA+ G +C +L Sbjct: 227 GAIDPSYYTGSLHWVPVTLQKYWQFTVDSVTISGAVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDSL 311
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG D +YKG +Y+ VT+K YWQ M V + G + C GC AI D+GTSL+ GP + ++ AIGA +I E Sbjct: 244 MLGGTDSKYYKGPLSYLNVTRKAYWQVHMEQVDV-GSSLTLCKGGCEAIVDTGTSLIVGPVDEVRELQKAIGAVPLIQGE 322
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 9 GGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 224 G +DP +Y G +VPVT + YWQF + V I G C GC AI D+GTS L GP++ I I AIGA+ Sbjct: 227 GAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIGAT 297
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 224 +FGG+D ++ G +VP++ + YWQ + + ++G+ CS C AI D+GTSLL+GPT I I IGAS Sbjct: 226 MFGGIDSSYFTGNLNWVPLSSETYWQITVDSITMNGQVIA-CSGSCQAIVDTGTSLLSGPTNAIASIQGYIGAS 298
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 218 V GG DP HY T++PVT YWQ M V + G C+ GC+AI D+GTSL+ GP+ I +N AIG Sbjct: 229 VLGGSDPAHYVPPLTFIPVTIPAYWQVHMESVKV-GTGLSLCAQGCSAILDTGTSLITGPSEEIRALNKAIG 299
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG D +Y+G TY VT++ YWQ M D L G + C GC AI D+GTSL+ GP + +++ AIGA +I E Sbjct: 219 MLGGTDSKYYRGSLTYHNVTRQAYWQIHM-DQLDVGSSLTVCKGGCEAIVDTGTSLMVGPVDEVRELHKAIGAVPLIQGE 297 The following BLAST results are available for this feature:
BLAST of CF417530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417530 ID=CF417530; Name=CF417530; organism=Citrus sinensis; type=EST; length=660bpback to top |