CF417530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG D +YKG +Y+ VT+K YWQ + V + T C GC AI D+GTSL+ GP + ++ AIGA +I E Sbjct: 246 MLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLT-LCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGE 324
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 218 V GG DP HY+G YV ++K G WQ M V + G T C GC A+ D+GTS ++GPT+ + I A+G Sbjct: 238 VLGGSDPQHYQGNFHYVSISKAGSWQITMKGVSV-GPATLLCEEGCMAVVDTGTSYISGPTSSLQLIMQALG 308
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGK 272 V GG DP HY T+VPVT YWQ M V + G C+ GC AI D+GTSL+ GPT I ++ AIG +++ E L + K Sbjct: 234 VLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKV-GPGLTLCAKGCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPK 322
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG+D +YKG Y VT+K YWQ M V + G + C GC AI D+GTSL+ G + ++ AIGA +I E Sbjct: 181 MLGGIDSKYYKGSLDYHNVTRKAYWQIHMNQVAV-GSSLTLCKGGCEAIVDTGTSLIVGQPEEVRELGKAIGAVPLIQGE 259
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 221 + GGVDP +Y G+ +VPV++ YWQ + + ++GE G C +GC I D+GTSLL GP + I I A Sbjct: 226 MLGGVDPSYYSGDLHWVPVSRPLYWQLAVDRISMNGEAIG-CDSGCQGIVDTGTSLLIGPRDPVLNIQKIINA 297
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI 215 +FGGVD +YKG+ +VP+T+ YWQ + + G G C GC AI D+GTS+L GP+ + +I+ I Sbjct: 228 MFGGVDKKYYKGDLKWVPLTQTSYWQIALDRITCRGRVIG-CPRGCQAIVDTGTSMLHGPSKAVAKIHSLI 297 The following BLAST results are available for this feature:
BLAST of CF417530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417530 ID=CF417530; Name=CF417530; organism=Citrus sinensis; type=EST; length=660bpback to top |