CF417557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_THEVO (Peptidyl-tRNA hydrolase OS=Thermoplasma volcanium GN=pth PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 1.899e-12 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 +KL + VR+DL MG GKIA+Q AHAA + M+ + + +W GQ KIVV N E+ Sbjct: 3 VKLVVAVRKDLDMGKGKIAAQVAHAAVSCAIKAMKEKKKIFDEWMDEGQKKIVVKVPNVDEI 64 HSP 2 Score: 39.6614 bits (91), Expect = 1.899e-12 Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 2 Query: 509 AENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 A++ G+ V+ D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 71 ADSMGIINEVIQDRGYTQVEPGTVTCIGLGPDYEVYLDDITGKYKLL 117
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_THEAC (Peptidyl-tRNA hydrolase OS=Thermoplasma acidophilum GN=pth PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 4.164e-12 Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 3 Query: 300 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 K+ + VR+DL MG GKIA+Q AHAA M+ +R + +W GQ KIVV + E+ Sbjct: 4 KMVIAVRKDLDMGKGKIAAQVAHAAVTCAIRSMKINRDVFNEWYDEGQRKIVVKVNDLDEI 64 HSP 2 Score: 41.2022 bits (95), Expect = 4.164e-12 Identity = 18/48 (37.50%), Postives = 30/48 (62.50%), Query Frame = 2 Query: 506 VAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 +A++ G+ +V D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 70 MADSMGIVNEIVQDRGYTQVEPGTITCIGLGPDEEEKLDKITGKYKLL 117
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_HALLT (Peptidyl-tRNA hydrolase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pth PE=3 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 4.164e-12 Identity = 22/62 (35.48%), Postives = 39/62 (62.90%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 +K A+V R D+ MG GK+A+Q AHA+ Y + + R + +KW+ GQ K+V+ ++ ++ Sbjct: 1 MKQAIVARTDIGMGEGKLAAQVAHASLSAYQD---AGRRVRKKWQGEGQKKVVLKGDSESQL 59 HSP 2 Score: 45.0542 bits (105), Expect = 4.164e-12 Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 2 Query: 485 SRNKLWEVAENT---GLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 634 S ++L+E+A+ G+P ++ DAG TQ+ G+ T LA+GP VD VTG Sbjct: 55 SESQLFELADKADKEGIPYAIIRDAGHTQLEPGTVTALAVGPARDDTVDRVTG 107
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METAC (Peptidyl-tRNA hydrolase OS=Methanosarcina acetivorans GN=pth PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 5.410e-12 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 2 Query: 494 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 +L E A GLPT ++ DAG T++ AG+ TVL IGP + ++D VT +L+ Sbjct: 64 ELKEKARREGLPTALIQDAGLTEIPAGTVTVLGIGPAKEEVIDKVTRDLKLV 115 HSP 2 Score: 43.1282 bits (100), Expect = 5.410e-12 Identity = 24/55 (43.64%), Postives = 31/55 (56.36%), Query Frame = 3 Query: 294 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVV 458 + K +V R DLK+ GK A Q AHAA +SD L KW++ GQ KIV+ Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKSD---LEKWKEGGQKKIVL 54
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METBU (Peptidyl-tRNA hydrolase OS=Methanococcoides burtonii (strain DSM 6242) GN=pth PE=3 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 7.028e-12 Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 2 Query: 494 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 +L E A GL T ++ DAG T+++ G+ TVL IGP +D VTG +L+ Sbjct: 64 ELKEKARREGLSTALITDAGLTEIAPGTVTVLGIGPARADYIDKVTGNLKLV 115 HSP 2 Score: 45.0542 bits (105), Expect = 7.028e-12 Identity = 22/63 (34.92%), Postives = 36/63 (57.14%), Query Frame = 3 Query: 294 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 + K +++R DLK+ GK+A Q AHAA +SD L W++ GQ K+V+ + Q++ Sbjct: 3 EYKQCIIIRDDLKLSKGKLAVQVAHAAVSAAEWASRSD---LENWKEGGQKKVVLRVEKLQDL 62
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METBF (Peptidyl-tRNA hydrolase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pth PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 9.130e-12 Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 2 Query: 494 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D VT +L+ Sbjct: 64 ELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKVTRNLKLV 115 HSP 2 Score: 42.743 bits (99), Expect = 9.130e-12 Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 3 Query: 294 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVV 458 + K +V R+DLK+ GK A Q AHAA ++D L KW++ GQ KIV+ Sbjct: 3 EYKQCIVTREDLKLSKGKFAVQVAHAAISASEWASKND---LEKWKEGGQKKIVL 54
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METJA (Peptidyl-tRNA hydrolase OS=Methanocaldococcus jannaschii GN=pth PE=1 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 1.186e-11 Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 2 Query: 497 LWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 ++ A + GLP ++ DAG TQ+ G+ T +AIGP +D +TG +LL Sbjct: 65 IYNKARSEGLPCSIIRDAGHTQLEPGTLTAVAIGPEKDEKIDKITGHLKLL 115 HSP 2 Score: 44.669 bits (104), Expect = 1.186e-11 Identity = 19/62 (30.65%), Postives = 37/62 (59.68%), Query Frame = 3 Query: 297 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 +K+ +V+R DL MG GK+ +Q HA + + + + + +W + GQ K+VV +++E+ Sbjct: 1 MKMVVVIRNDLGMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEKEL 62
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METMA (Peptidyl-tRNA hydrolase OS=Methanosarcina mazei GN=pth PE=3 SV=2) HSP 1 Score: 47.3654 bits (111), Expect = 1.541e-11 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 2 Query: 494 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D +T +L+ Sbjct: 64 ELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKITKDLKLV 115 HSP 2 Score: 42.743 bits (99), Expect = 1.541e-11 Identity = 24/63 (38.10%), Postives = 34/63 (53.97%), Query Frame = 3 Query: 294 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 + K +V R DLK+ GK A Q AHAA + D L KW++ GQ KIV+ + +E+ Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKGD---LEKWKEGGQKKIVLKVPSIKEL 62
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METM7 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pth PE=3 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 2.599e-11 Identity = 20/59 (33.90%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 306 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKEL 63 HSP 2 Score: 43.5134 bits (101), Expect = 2.599e-11 Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 485 SRNKLWEVAENT---GLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 S +L E+ +N GLP ++ DAGRTQV GS T + IGP + + VT +LL Sbjct: 59 SEKELLEIFKNVNIEGLPCSLIRDAGRTQVEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CF417557 vs. ExPASy Swiss-Prot
Match: PTH_METM6 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pth PE=3 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 3.376e-11 Identity = 20/59 (33.90%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 306 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 482 A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASLQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKEL 63 HSP 2 Score: 43.1282 bits (100), Expect = 3.376e-11 Identity = 23/58 (39.66%), Postives = 33/58 (56.90%), Query Frame = 2 Query: 485 SRNKLWEVAENT---GLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 649 S +L E+ +N GLP ++ DAGRTQ+ GS T + IGP + + VT +LL Sbjct: 59 SEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116 The following BLAST results are available for this feature:
BLAST of CF417557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417557 ID=CF417557; Name=CF417557; organism=Citrus sinensis; type=EST; length=712bpback to top |