CF417558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGRVHR LK+ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRVHRFLKKGNYGNRVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIA 104
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A2B_HUMAN (Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIA 104
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_MYTTR (Histone H2A OS=Mytilus trossulus PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAGRVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_MYTGA (Histone H2A OS=Mytilus galloprovincialis PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_MYTED (Histone H2A OS=Mytilus edulis PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_MYTCH (Histone H2A OS=Mytilus chilensis PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_MYTCA (Histone H2A OS=Mytilus californianus PE=3 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 57/89 (64.04%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIA 514 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIA 103
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 58/89 (65.17%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIA 514 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA 104
BLAST of CF417558 vs. ExPASy Swiss-Prot
Match: H2AJ_MACFA (Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 58/89 (65.17%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 251 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIA 514 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA 104 The following BLAST results are available for this feature:
BLAST of CF417558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417558 ID=CF417558; Name=CF417558; organism=Citrus sinensis; type=EST; length=726bpback to top |