CF417564

Overview
NameCF417564
Unique NameCF417564
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417564 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1 
Query:  193 KHVMEIGQFAVTEYNKRSKSALKFESVEKAWTQVVSGTNYRLILVVKDGPSTKKFEAIVWEKPWEHFKSLTSFKPMIGGWTPID 444
            K + +I  FAV E+N+R  + L+   V KA  QVV+G  YRL L V +    K +EA VW KPW +FK L  FK +I  +T  D
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPSFTISD 142
[Close]
BLAST of CF417564 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1 
Query:  205 EIGQFAVTEYNKRSKSALKFESVEKAWTQVVSGTNYRLILVVKDGPSTKKFEAIVWEKPWEHFKSLTSFKPM 420
            E+ +FAV E+NK+  + L+F  V     QVV+G  Y + L   +G   K +EA VW KPWE+FK L  FKP+
Sbjct:    6 ELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77
The following BLAST results are available for this feature:
BLAST of CF417564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT7_ARATH3.495e-1144.05Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYTA_HELAN7.787e-1144.44Cysteine proteinase inhibitor A OS=Helianthus annu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-494 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417564 ID=CF417564; Name=CF417564; organism=Citrus sinensis; type=EST; length=585bp
TTCGAGAGCGTGGAGAAGGCCTGGACTCAGGTGGTTTCCGGCACCAATTA
CCGGCTGATCTTGGTCGTCAAGGACGGACCTTCGACCAAGAAATTTGTAG
CTGTCGTTTGGGAGAAGCCATGGGAGCATTTCAAGAGTCTCACCTCGTTT
AAGCCTATGCTTGGGGGATGGACTCCGATAGACCCCACGGAGAAGCACGT
GATGGAGATCGGGCAGTTCGCGGTGACGGAGTACAACAAACGGTCAAAGA
GCGCGTTGAAGTTCGAGAGCGTGGAGAAGGCCTGGACTCAGGTGGTTTCC
GGCACCAATTACCGGCTGATCTTGGTCGTCAAGGACGGACCTTCGACCAA
GAAATTTGAAGCTATCGTTTGGGAGAAGCCATGGGAGCATTTCAAGAGTC
TCACCTCGTTTAAGCCTATGATTGGGGGATGGACTCCGATAGACCCCCAC
AGANNAAGCACGTGATGGAGATCGGGCAGTTCGCGGTGACGGAGTACNAC
AAACGGTCAAAGAGCGCATTGAANTTCNAGAACGTGGAGAAGGCCTGGAC
TCAGGTGGTTTCCGGCACTAATTACCGGCTGATCT
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