CF417565

Overview
NameCF417565
Unique NameCF417565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 3
Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVEL---------------GN-------LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            N E  AL  +  SL+ P   L+ W     +PC  +W  + C + + VT L L    L G     L  L+ L   +L KNN++G IP +L               GN       +K+L S++L  N ++G++P    KL  L  L  + N+L+G++P+    ++SLK + +  N   G
Sbjct:   26 NQEVSALNVMFTSLNSPSK-LKGWKANGGDPCEDSWEGVKC-KGSSVTELQLSGFELGGSRGYLLSNLKSLTTFDLSKNNLKGNIPYQLPPNIANLDFSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSLKKLHLQDNRFTG 200          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 3
Query:  153 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            A+  L  +L  P  VL  W  +  +PC   W  I CN  + ++ + +  +NL G L   L K   ++ ++   N I G+IP  L    +L    L  N  +G IP SL  L  L  + LNDN L+G++P     +  L  +D+SSN++ GT P S
Sbjct:   38 AINGLFAALGAP--VLPGWIASGGDPCGEAWQGIICNVSDIIS-ITVNAANLQGELGDNLAKFTSIRGIDFSNNRIGGSIPSTLP--VTLQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPS 187          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            NS+  AL A   S+  P     +W+ T     +W  +TC  D   V  L L    L G + P  LGKLE L+ L L  N + G +P ++ +L SL  + L +NN SG++P  ++  + L  L L+ N  TG+IP     +  L  + + +N L G  P
Sbjct:   46 NSDRQALLAFAASV--PHLRRLNWNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVP 199          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 3
Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIPLN 638
            +T L LG+ +     +  +  ++ L  L L  NN+ GTIP  +G   SL  +DL  N + G IP SL  L  L  L L +N L G  P +     SL+ VDVS NDL G+ P+      + LN
Sbjct:  269 LTELRLGDISSGSSSLDFIKDMKSLSVLVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNNTLNGSFPTQKT--QSLRNVDVSYNDLSGSLPSWVSLPSLKLN 389          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 50/160 (31.25%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +S+  AL  +  S++ P  + Q W  +  +PC   W  ITC+  +RVT++ L +  LSG L   L KL  +   ++  NN+ G +P +L    +L  L+L NN  +G    S++ +  L +L L  N+L  Q+  +   ++SL ++D+SSN   G+ P +
Sbjct:   29 SSDTSALNIMFSSMNSPGQLSQ-WTASGGDPCGQNWKGITCS-GSRVTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLP--PNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQLK-QLAIDFTKLTSLSILDLSSNAFIGSLPNT 183          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 3
Query:  204 SW--DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLA-KLKSLVFLRLNDN 512
            SW  DP +     W  +TC   N     R+  LDL +S L+G +VPE+  L  L+ L+   NN+ G +P  L  +KSL+ ++L  NN+SG +P +L  K+K+ + L +  N
Sbjct:  385 SWQGDPCVPQQLLWDGLTCEYTNMSTPPRIHSLDLSSSELTGIIVPEIQNLTELKKLDFSNNNLTGGVPEFLAKMKSLLVINLSGNNLSGSVPQALLNKVKNGLKLNIQGN 495          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 3
Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +DL  + L+G + PE G L  L  + L  N + G IP E GN+ +L SL L  N +SG++P  L  L ++  + L+ N   G+IP     +++L+   VS N L GT P
Sbjct:   92 IDLSRNYLNGSIPPEWGVLP-LVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          

HSP 2 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  285 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            LGN  L+G +  E G +  L  L L  N + G +P+ELGNL ++  + L +NN +G+IP + AKL +L   R++DN+L+G IP  +   + L+ + + ++ L G  P
Sbjct:  118 LGN-RLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIP 223          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 3
Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKL-KSLVFLRLNDNRLTGQIPRELVGIS---SLKVVDVSSNDLCGTXP 605
            L L ++NL+G L  E+G+   LQ + L  N++ G+IP+ELG   SL  +DL  N ++G +PPS+  L   LV  +++ N L+G +P   +  S   +L+V+D+  N   G  P
Sbjct:  104 LQLPSANLTGSLPREIGEFSMLQSVFLNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFP 216          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 58/183 (31.69%), Postives = 85/183 (46.45%), Query Frame = 3
Query:  141 SEGDALYALRRSLS-DPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIP--VELGNLKSLI----------------------SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            S+ +A+   + SL    +N L SW+     PCTW  + CN  + V RL + N  LSG + +  L  L  L+ L    N  +G  P   +L  LKSL                        + L  N  +G+IP S+AKL  L+ LRL+ N+ TG+IP        L ++++S+N L G  P S
Sbjct:   33 SDSEAILKFKESLVVGQENALASWNAKSP-PCTWSGVLCNGGS-VWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTGQIPSSVAKLPKLLELRLDGNQFTGEIPE---FEHQLHLLNLSNNALTGPIPES 210          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 3
Query:  243 HITC-------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            +ITC       N    V R+ L + NL+G + PE  KL HL+ L+L +N++ G+IP E  +++ L  L    N +SG  P  L +L  L  L L  N+ +G IP ++  +  L+ + + SN   G
Sbjct:   76 NITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMR-LEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTG 199          
The following BLAST results are available for this feature:
BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
SRF5_ARATH1.123e-1129.38Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
SRF3_ARATH1.123e-1132.90Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
Y5830_ARATH1.467e-1132.91Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y1561_ARATH1.467e-1136.59Probable LRR receptor-like serine/threonine-protei... [more]
SRF7_ARATH1.467e-1131.25Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y1756_ARATH1.916e-1136.04Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH2.502e-1136.70Probable LRR receptor-like serine/threonine-protei... [more]
TMKL1_ARATH2.502e-1136.28Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
RLK_ARATH2.502e-1131.69Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH5.574e-1133.60Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-495 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bp
GAGAGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCA
GTGCAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAAT
AATAGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGG
ACGCGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTT
CAGAGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAAC
CTGTAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATC
TATCCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATAC
CTGGAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGG
TAACTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGG
GGAAAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGG
CTTAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAAT
TTCAAGTCTCAAAGTTGTGGATGTTTCNAGCAATGATCTGTGTGGAACAN
TTCCTACAAGCGGACCATTTGAACACATCCCACTCAACACTTTGAGAAT
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