CF417565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11 Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 3 Query: 138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVEL---------------GN-------LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596 N E AL + SL+ P L+ W +PC +W + C + + VT L L L G L L+ L +L KNN++G IP +L GN +K+L S++L N ++G++P KL L L + N+L+G++P+ ++SLK + + N G Sbjct: 26 NQEVSALNVMFTSLNSPSK-LKGWKANGGDPCEDSWEGVKC-KGSSVTELQLSGFELGGSRGYLLSNLKSLTTFDLSKNNLKGNIPYQLPPNIANLDFSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSLKKLHLQDNRFTG 200
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11 Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 153 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 A+ L +L P VL W + +PC W I CN + ++ + + +NL G L L K ++ ++ N I G+IP L +L L N +G IP SL L L + LNDN L+G++P + L +D+SSN++ GT P S Sbjct: 38 AINGLFAALGAP--VLPGWIASGGDPCGEAWQGIICNVSDIIS-ITVNAANLQGELGDNLAKFTSIRGIDFSNNRIGGSIPSTLP--VTLQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPS 187
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11 Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605 NS+ AL A S+ P +W+ T +W +TC D V L L L G + P LGKLE L+ L L N + G +P ++ +L SL + L +NN SG++P ++ + L L L+ N TG+IP + L + + +N L G P Sbjct: 46 NSDRQALLAFAASV--PHLRRLNWNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVP 199
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11 Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 3 Query: 270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIPLN 638 +T L LG+ + + + ++ L L L NN+ GTIP +G SL +DL N + G IP SL L L L L +N L G P + SL+ VDVS NDL G+ P+ + LN Sbjct: 269 LTELRLGDISSGSSSLDFIKDMKSLSVLVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNNTLNGSFPTQKT--QSLRNVDVSYNDLSGSLPSWVSLPSLKLN 389
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11 Identity = 50/160 (31.25%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 +S+ AL + S++ P + Q W + +PC W ITC+ +RVT++ L + LSG L L KL + ++ NN+ G +P +L +L L+L NN +G S++ + L +L L N+L Q+ + ++SL ++D+SSN G+ P + Sbjct: 29 SSDTSALNIMFSSMNSPGQLSQ-WTASGGDPCGQNWKGITCS-GSRVTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLP--PNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQLK-QLAIDFTKLTSLSILDLSSNAFIGSLPNT 183
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 204 SW--DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLA-KLKSLVFLRLNDN 512 SW DP + W +TC N R+ LDL +S L+G +VPE+ L L+ L+ NN+ G +P L +KSL+ ++L NN+SG +P +L K+K+ + L + N Sbjct: 385 SWQGDPCVPQQLLWDGLTCEYTNMSTPPRIHSLDLSSSELTGIIVPEIQNLTELKKLDFSNNNLTGGVPEFLAKMKSLLVINLSGNNLSGSVPQALLNKVKNGLKLNIQGN 495
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605 +DL + L+G + PE G L L + L N + G IP E GN+ +L SL L N +SG++P L L ++ + L+ N G+IP +++L+ VS N L GT P Sbjct: 92 IDLSRNYLNGSIPPEWGVLP-LVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199 HSP 2 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 285 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605 LGN L+G + E G + L L L N + G +P+ELGNL ++ + L +NN +G+IP + AKL +L R++DN+L+G IP + + L+ + + ++ L G P Sbjct: 118 LGN-RLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIP 223
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKL-KSLVFLRLNDNRLTGQIPRELVGIS---SLKVVDVSSNDLCGTXP 605 L L ++NL+G L E+G+ LQ + L N++ G+IP+ELG SL +DL N ++G +PPS+ L LV +++ N L+G +P + S +L+V+D+ N G P Sbjct: 104 LQLPSANLTGSLPREIGEFSMLQSVFLNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFP 216
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 58/183 (31.69%), Postives = 85/183 (46.45%), Query Frame = 3 Query: 141 SEGDALYALRRSLS-DPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIP--VELGNLKSLI----------------------SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 S+ +A+ + SL +N L SW+ PCTW + CN + V RL + N LSG + + L L L+ L N +G P +L LKSL + L N +G+IP S+AKL L+ LRL+ N+ TG+IP L ++++S+N L G P S Sbjct: 33 SDSEAILKFKESLVVGQENALASWNAKSP-PCTWSGVLCNGGS-VWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTGQIPSSVAKLPKLLELRLDGNQFTGEIPE---FEHQLHLLNLSNNALTGPIPES 210
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 3 Query: 243 HITC-------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596 +ITC N V R+ L + NL+G + PE KL HL+ L+L +N++ G+IP E +++ L L N +SG P L +L L L L N+ +G IP ++ + L+ + + SN G Sbjct: 76 NITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMR-LEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTG 199 The following BLAST results are available for this feature:
BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bpback to top |