CF417565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 60/189 (31.75%), Postives = 86/189 (45.50%), Query Frame = 3 Query: 138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPC-----TWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPP-------------------------SLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 +S+ D L + +L++ +SWDP L +PC WF + C+ N V L L L+G+L + L +++L+ + NN G +P ++ SL SL L NN SG+IP SLA L L+ LRLN N+ GQIP LK+ +NDL G P S Sbjct: 45 DSDADCLLRFKDTLANGSE-FRSWDP-LSSPCQGNTANWFGVLCS--NYVWGLQLEGMGLTGKLNLDPLVPMKNLRTISFMNNNFNGPMP-QVKRFTSLKSLYLSNNRFSGEIPADAFLGMPLLKKILLANNAFRGTIPSSLASLPMLLELRLNGNQFQGQIPS--FQQKDLKLASFENNDLDGPIPES 226
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 141 SEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 S+ AL L + P + Q W +PC W +TC+ +RVT++ L LSG L L KL L L+L NN+ G +P + +L L+L NN +G SL+++ L +L L N+ GQI + + SL +D S N + P + Sbjct: 30 SDTSALNTLFSGMHSPAQLTQ-WTAAAGDPCGQNWRGVTCS-GSRVTQIKLSGLELSGTLGGYMLDKLTSLTELDLSSNNLGGDLPYQFP--PNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPAT 185
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11 Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 225 NPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 +PC W + C+ N +T + + + G L L +Q ++ N+I GTIP L + S+ +L L +N +G IP +L+ L L L L N L+G+IP +S L +D+SSN L G P+S Sbjct: 55 DPCGEKWQGVVCDSSN-ITEIRIPGMKVGGGLSDTLADFSSIQVMDFSSNHISGTIPQALPS--SIRNLSLSSNRFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLPSS 182
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 3 Query: 279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611 L L ++ LSG++ + L HL+ L L N G P L +LI LD+ +NN +G IP S+ L L L L +N +G +P +G+ +VS+N+L G+ P+S Sbjct: 96 LSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSISLGLVDF---NVSNNNLNGSIPSS 203 The following BLAST results are available for this feature:
BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bpback to top |