CF417565 | Citrus Genome Database

Overview


Name	CF417565
Unique Name	CF417565
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	649

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CF417565_ssr1	microsatellite	CF417565_ssr1:1..14.	BLAST: Citrus ESTs to Prunus persica proteins V1
CF417565_ssr20	microsatellite	CF417565_ssr20:20..40.	BLAST: Citrus ESTs to Prunus persica proteins V1
CF417565_ssr91	microsatellite	CF417565_ssr91:91..102.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7970	contig	Csv1_Contig7970:80..728.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.370e-17
Identity = 49/126 (38.89%), Postives = 79/126 (62.70%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIPLNTLR 647
            +T LDL NS L G +  ++ + + LQ L+L  N++ G+IP  +GN  SL  L L +NN++G IP SL+ L+ L  L+L  N+L+G+IP+EL  + +L +V+VS N L G  P    F+ +  + ++
Sbjct:  465 LTVLDLRNSALIGSVPADICESQSLQILQLDGNSLTGSIPEGIGNCSSLKLLSLSHNNLTGPIPKSLSNLQELKILKLEANKLSGEIPKELGDLQNLLLVNVSFNRLIGRLPLGDVFQSLDQSAIQ 590

HSP 2 Score: 83.5741 bits (205), Expect = 9.817e-16
Identity = 58/178 (32.58%), Postives = 84/178 (47.19%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCN-QDNRVTRLDLGNSNLSGRLVPELGKLE-----------------------HLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSL-AKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            N +   L   +  L+DP + L+SW      PC+W ++ CN + +RV  L L    L+G++   + KL+                       HLQ L+L  NN+ G IP  LG++ SL  LDL  N+ SG +   L     SL +L L+ N L GQIP  L   S L  +++S N   G
Sbjct:   34 NDDVLGLIVFKSDLNDPFSHLESWTEDDNTPCSWSYVKCNPKTSRVIELSLDGLALTGKINRGIQKLQRLKVLSLSNNNFTGNINALSNNNHLQKLDLSHNNLSGQIPSSLGSITSLQHLDLTGNSFSGTLSDDLFNNCSSLRYLSLSHNHLEGQIPSTLFRCSVLNSLNLSRNRFSG 211

HSP 3 Score: 83.5741 bits (205), Expect = 9.817e-16
Identity = 38/112 (33.93%), Postives = 67/112 (59.82%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            + R+DL +++ SG L   L KL+ L + ++  N + G  P  +G++  L+ LD  +N ++GK+P S++ L+SL  L L++N+L+G++P  L     L +V +  ND  G  P
Sbjct:  273 LNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKLSGEVPESLESCKELMIVQLKGNDFSGNIP 384

HSP 4 Score: 82.4185 bits (202), Expect = 2.187e-15
Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 3

Query:  276 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            RLDL +++L+G +  E+G   H++YL L  N+    +P E+  L++L  LDL N+ + G +P  + + +SL  L+L+ N LTG IP  +   SSLK++ +S N+L G  P S
Sbjct:  419 RLDLSHNSLTGSIPGEVGLFIHMRYLNLSWNHFNTRVPPEIEFLQNLTVLDLRNSALIGSVPADICESQSLQILQLDGNSLTGSIPEGIGNCSSLKLLSLSHNNLTGPIPKS 530

HSP 5 Score: 77.411 bits (189), Expect = 7.035e-14
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            + +  L L  +  SG L  ++G   HL  ++L  N+  G +P  L  LKSL   D+ NN +SG  PP +  +  LV L  + N LTG++P  +  + SLK +++S N L G  P S
Sbjct:  247 HNLKELQLQRNQFSGALPSDIGLCPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKLSGEVPES 362

HSP 6 Score: 75.485 bits (184), Expect = 2.673e-13
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            R+  LDL +++LSG +   +  L +L+ L+L +N   G +P ++G    L  +DL +N+ SG++P +L KLKSL    +++N L+G  P  +  ++ L  +D SSN+L G  P+S
Sbjct:  224 RLRALDLSSNSLSGSIPLGILSLHNLKELQLQRNQFSGALPSDIGLCPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSS 338

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.789e-17
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 3

Query:  141 SEGDALYALRRSL-SDPDNVLQSWDPTLVNP-CTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSN 584
            SEG  L   R  + SDP   L +W+ +  +  C+WF +TC  DN+V  L+L   +L G L PEL +L  L+ L L KN + G IP E  +   L  LDL +NN++G +PP L K+ +   L L+ N+  G +  + + + SL  V ++ N
Sbjct:   32 SEGFVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTC-VDNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFAGFMTVKFLRLQSLYKVQMNKN 180

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.789e-17
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 3

Query:  156 LYALRRSLSDPDNVLQSWD--PTLVNPCTWFHITC--NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGN-LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            L   + SL DP N L +W    +  + C    ++C   ++NR+  L L +  LSG++   L     LQ L+L  N+  G IP ++ + L  L++LDL  N +SG IP  +   K L  L LN N+LTG IP EL  ++ L+ + ++ NDL G+ P+
Sbjct:   25 LKGFKSSLKDPSNQLNTWSFPNSSSSICKLTGVSCWNAKENRILSLQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQIVDCKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPS 180

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.789e-17
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 3

Query:  141 SEGDALYALR-RSLSDPDNVLQSWDPTLVNP-CTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISS 557
            S+G AL   R R  SDP   L +W+ + +N  C W  +TC  D +V  LDL   +L G L PEL +L  L+ L L +N+  G IP E G+ ++L  LDL  N++SG+IPP L+   SL  L L+ N+ +  +  ++V + S
Sbjct:   28 SQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSGVTC-VDGKVQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSLKHLLLSGNKFSDDMRIKIVRLQS 167

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.052e-17
Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = 3

Query:  156 LYALRRSLSDPDNVLQSW---DPTLVNPCTWFHITC--NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGN-LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            L  L+ SL DP + L SW   + +  + C    ++C   ++NR+  L L +  L+G +   L     LQ L+L  N++ G+IP ++ + L  L++LDL  N + G IP  + + K L  L L+DN+L+G IP +L  +  L+ + ++ NDL GT P+
Sbjct:   31 LQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPS 187

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.986e-17
Identity = 42/112 (37.50%), Postives = 70/112 (62.50%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            VT L++  + LSG + PE+G +  L  L L+ N + G IP  LGN+K+L  L LY N ++G IPP L +++S++ L +++N+LTG +P     +++L+ + +  N L G  P
Sbjct:  264 VTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIP 375

HSP 2 Score: 83.1889 bits (204), Expect = 1.282e-15
Identity = 44/113 (38.94%), Postives = 70/113 (61.95%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            ++  L L  ++LSG +  E+G L +L+ L L +NN+ G IP   GNLK++  L+++ N +SG+IPP +  + +L  L L+ N+LTG IP  L  I +L V+ +  N L G+ P
Sbjct:  215 KLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIP 327

HSP 3 Score: 82.0333 bits (201), Expect = 2.856e-15
Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS----GPFEHIPLN 638
            L L  + L+G +   LG ++ L  L LY N + G+IP ELG ++S+I L++  N ++G +P S  KL +L +L L DN+L+G IP  +   + L V+ + +N+  G  P +    G  E++ L+
Sbjct:  291 LSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLD 414

HSP 4 Score: 81.6481 bits (200), Expect = 3.730e-15
Identity = 41/115 (35.65%), Postives = 72/115 (62.61%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +VT + + ++ L+G +    G L  L  L L+ N++ G+IP E+GNL +L  L L  NN++GKIP S   LK++  L + +N+L+G+IP E+  +++L  + + +N L G  P++
Sbjct:  191 KVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPST 305

HSP 5 Score: 80.1073 bits (196), Expect = 1.085e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +++   DL  + L G + PELG L +L  L L +N + G+IP E+G L  +  + +Y+N ++G IP S   L  LV L L  N L+G IP E+  + +L+ + +  N+L G  P+S
Sbjct:  142 SKLEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSS 257

HSP 6 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            NR+++L L  + LSG++   +  L +L+YL+L  N     IP  L NL  L  ++L  N++   IP  L KL  L  L L+ N+L G+I  +   + +L+ +D+S N+L G  P S
Sbjct:  526 NRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPS 641

HSP 7 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP 632
            LDL ++  S  + P L  L  L Y+ L +N++  TIP  L  L  L  LDL  N + G+I      L++L  L L+ N L+GQIP     + +L  VDVS N+L G  P +  F + P
Sbjct:  555 LDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAP 672

HSP 8 Score: 75.485 bits (184), Expect = 2.673e-13
Identity = 38/116 (32.76%), Postives = 63/116 (54.31%), Query Frame = 3

Query:  258 QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            Q  ++    L N++++G + PE+  +  L  L+L  N I G +P  + N+  +  L L  N +SGKIP  +  L +L +L L+ NR + +IP  L  +  L  +++S NDL  T P
Sbjct:  476 QSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIP 591

HSP 9 Score: 74.7146 bits (182), Expect = 4.560e-13
Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +DL N+N  G+L     + + L    L  N+I G IP E+ N+  L  LDL +N I+G++P S++ +  +  L+LN NRL+G+IP  +  +++L+ +D+SSN      P
Sbjct:  459 IDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIP 567

HSP 10 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            +T +DL  +  SG + P  G+   L+Y +L  N + G IP ELG+L +L +L L  N ++G IP  + +L  +  + + DN LTG IP     ++ L  + +  N L G+ P+
Sbjct:  120 LTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPS 232

HSP 11 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            L L  + L+G +  E+G+L  +  + +Y N + G IP   GNL  L++L L+ N++SG IP  +  L +L  L L+ N LTG+IP     + ++ ++++  N L G  P
Sbjct:  171 LHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSGEIP 279

HSP 12 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 3

Query:  198 LQSW-DPTLVNPCT-WFHITCNQDNRVTRLDLGNSNLSGRLVP-ELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            L SW +P   + CT W+ + C+  + + RL+L N+ + G         L +L +++L  N   GTI    G    L   DL  N + G+IPP L  L +L  L L +N+L G IP E+  ++ +  + +  N L G  P+S
Sbjct:   70 LSSWVNPNTSSFCTSWYGVACSLGS-IIRLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSS 209

HSP 13 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            ++++LDL ++ ++G L   +  +  +  L+L  N + G IP  +  L +L  LDL +N  S +IPP+L  L  L ++ L+ N L   IP  L  +S L+++D+S N L G
Sbjct:  503 QLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDG 612

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.986e-17
Identity = 57/207 (27.54%), Postives = 98/207 (47.34%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSN----------------------------------LSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP-TSGPFE--HIPLNTLR 647
            +S+   L   ++++SDP ++L SW     + C+WF ++C+  +RV  L++  S                                   L+G L   +  L  L+ L L  N+  G IPV +  ++ L  LDL  N ++G +P     L++L  + L  NR++G+IP  L  ++ L+++++  N L GT P   G F   H+PLN L+
Sbjct:   44 DSDKSVLLRFKKTVSDPGSILASWVEESEDYCSWFGVSCDSSSRVMALNISGSGSSEISRNRFTCGDIGKFPLYGFGVRRDCTGNHGALAGNLPSVIMSLTGLRVLSLPFNSFSGEIPVGIWGMEKLEVLDLEGNLMTGSLPDQFTGLRNLRVMNLGFNRVSGEIPNSLQNLTKLEILNLGGNKLNGTVPGFVGRFRVLHLPLNWLQ 250

HSP 2 Score: 78.9518 bits (193), Expect = 2.418e-14
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGK-LEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            L+L  + L G++   LGK +  L YL +  NN+ G IP   G L SL  LDL +N++SG IP     LK+L  L LN+N L+G IP    G ++  V +VSSN+L G  P++
Sbjct:  639 LNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDFVNLKNLTVLLLNNNNLSGPIPS---GFATFAVFNVSSNNLSGPVPST 747

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.879e-17
Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            + + ++ LSG +  E G L HLQ L+   N+I GTIP    NL SL+SL+L +N++ G IP ++ +L +L  L L  N++ G IP  +  IS +K +D+S N+  G  P S
Sbjct:  268 VSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPLS 378

HSP 2 Score: 81.2629 bits (199), Expect = 4.872e-15
Identity = 59/189 (31.22%), Postives = 92/189 (48.68%), Query Frame = 3

Query:  153 ALYALRRSLSDPDNVLQSWDPTLVNP-CT-WFHITC-----------------------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIPLNTL 644
            AL A++  L D   VL+SW+ +  +  C+ W  I C                        Q   + +L L N+ ++G +   LG L+ L+ + L+ N + G+IPV LGN   L +LDL +N ++G IPPSL +   L  L L+ N L+G +P  +    +L  +D+  N+L G+ P        PL TL
Sbjct:   56 ALQAIKHELIDFTGVLKSWNNSASSQVCSGWAGIKCLRGQVVAIQLPWKGLGGTISEKIGQLGSLRKLSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTL 244

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.879e-17
Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 3

Query:  195 VLQSWDPTLVNP-CTWFHITCNQDN-RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            VL SW+ +  +P C W  +TC +   RV  L+LG   L+G + P +G L  L+ L L  N+   TIP ++G L  L  L++  N + G+IP SL+    L  + L+ N L   +P EL  +S L ++D+S N+L G  P S
Sbjct:   50 VLASWNHS--SPFCNWIGVTCGRRRERVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFPAS 188

HSP 2 Score: 85.1149 bits (209), Expect = 3.374e-16
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            L L  + LSG L    GKL +LQ ++LY N I G IP   GN+  L  L L +N+  G+IP SL + + L+ L ++ NRL G IP+E++ I SL  +D+S+N L G  P
Sbjct:  398 LSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFP 506

HSP 3 Score: 80.4925 bits (197), Expect = 8.310e-15
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 3

Query:  192 NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            N+L+   P+ ++ C+          R++ +DL +++L   +  ELG L  L  L+L KNN+ G  P  LGNL SL  LD   N + G+IP  +A+L  +VF ++  N  +G  P  L  ISSL+ + ++ N   G
Sbjct:  131 NLLEGRIPSSLSNCS----------RLSTVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSLESLSLADNSFSG 255

HSP 4 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            R+ +L L +++  GR+   LG+  +L  L +  N + GTIP E+  + SL  +DL NN ++G  P  + KL+ LV L  + N+L+G++P+ + G  S++ + +  N   G  P
Sbjct:  442 RLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAIP 554

HSP 5 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEH 626
            +DL N+ L+G    E+GKLE L  L    N + G +P  +G   S+  L +  N+  G IP  +++L SL  +  ++N L+G+IPR L  + SL+ +++S N   G  PT+G F +
Sbjct:  494 IDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAIP-DISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFRN 608

HSP 6 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEH-LQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            LD+G + L G L   +  L   L  L L +N I GTIP ++GNL SL  L L  N +SG++P S  KL +L  + L  N ++G+IP     ++ L+ + ++SN   G  P S
Sbjct:  349 LDVGYNRLGGELPASIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQS 460

HSP 7 Score: 67.0106 bits (162), Expect = 9.508e-11
Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +DL ++ +SG +    G +  LQ L L  N+  G IP  LG  + L+ L +  N ++G IP  + ++ SL ++ L++N LTG  P E+  +  L  +  S N L G  P
Sbjct:  422 VDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMP 530

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16
Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = 3

Query:  138 NSEGD--ALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRL-TGQIPRELVGISSLKVVDVSSNDLCGTXP-TSGPFEHIPLNTL 644
            +S+GD  A+ +L++SL+ P +   S DP   +PC W HI C    RVTR+ +G+S L G L P+L  L  L+ LEL  NNI G +P  L  L SL  L L NNN           L SL  + +++N   + +IP  L   S+L+    +S ++ G+ P   GP E   L+ L
Sbjct:   24 DSDGDLSAMLSLKKSLNPPSSFGWS-DP---DPCKWTHIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVP-SLSGLASLQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNNPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSIL 191

The following BLAST results are available for this feature:

BLAST of CF417565 vs. ExPASy Swiss-Prot

BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114


Match Name	E-value	Identity	Description
Y3804_ARATH	1.370e-17	38.89	Probably inactive leucine-rich repeat receptor-lik...	[more]
Y5458_ARATH	1.789e-17	36.67	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1699_ARATH	1.789e-17	35.26	Probable LRR receptor-like serine/threonine-protei...	[more]
MRH1_ARATH	1.789e-17	39.01	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1719_ARATH	3.052e-17	33.76	Probable inactive receptor kinase At1g27190 OS=Ara...	[more]
Y4885_ARATH	3.986e-17	37.50	Probable LRR receptor-like serine/threonine-protei...	[more]
RPK2_ARATH	3.986e-17	27.54	LRR receptor-like serine/threonine-protein kinase ...	[more]
IMK2_ARATH	8.879e-17	39.64	Probably inactive leucine-rich repeat receptor-lik...	[more]
EFR_ARATH	8.879e-17	36.88	LRR receptor-like serine/threonine-protein kinase ...	[more]
TMK1_ARATH	1.160e-16	36.99	Probable receptor protein kinase TMK1 OS=Arabidops...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-495 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bp
GAGAGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCA
GTGCAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAAT
AATAGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGG
ACGCGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTT
CAGAGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAAC
CTGTAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATC
TATCCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATAC
CTGGAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGG
TAACTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGG
GGAAAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGG
CTTAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAAT
TTCAAGTCTCAAAGTTGTGGATGTTTCNAGCAATGATCTGTGTGGAACAN
TTCCTACAAGCGGACCATTTGAACACATCCCACTCAACACTTTGAGAAT