CF417565 | Citrus Genome Database

Overview


Name	CF417565
Unique Name	CF417565
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	649

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14
Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 3

Query:  156 LYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCN-QDNRVTRLDLGN-------------------------SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGIS-SLKVVDVSSNDLCGTXPTS 611
            L  ++++L +P  +L SW+P   + C W+ + C+   +R+  L + +                         SNL+G++ P + KL+HL+ + L   N+ G +P     LK+L  LDL  NN+SG IP SL+ L +L  L L+ N LTG IP      + S   + +S N L G  P S
Sbjct:   38 LLQIKKALDNP-YILASWNPN-TDCCGWYCVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTPGLHLSHNQLSGKIPYS 214

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.124e-14
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3

Query:  204 SWDPTLVNPCTWFHITCNQD--------------------NRVTRLD------LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSN-DLCGTXP 605
            +W+ T      W  +TCNQD                    N ++RL       L ++ +SG    +  +L+ L +L L  NN+ G +P++    K+L S++L NN  +G IP SL++LK +  L L +N L+G IP +L  +SSL+ +D+S+N DL G  P
Sbjct:   47 NWNETSQVCNIWTGVTCNQDGSRIIAVRLPGVGLNGQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSGDIP-DLSVLSSLQHIDLSNNYDLAGPIP 206

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3

Query:  348 YLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP 632
            +L+L  N ++G+IP ELG +  L  L+L +N++SG IP  L  LK++  L L+ NR  G IP  L  ++ L  +D+S+N+L G  P S PF+  P
Sbjct:  667 FLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFP 761

HSP 2 Score: 75.0998 bits (183), Expect = 3.491e-13
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +++  L L  + LSG +  EL  L+ L+ L L  N++ G IP  L N   L  + L NN +SG+IP SL +L +L  L+L +N ++G IP EL    SL  +D+++N L G+ P
Sbjct:  475 SKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIP 588

HSP 3 Score: 72.7886 bits (177), Expect = 1.733e-12
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGK--LEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            ++  LD+ ++NL+G +   + K  + +L+ L L  N  +G IP  L N   L+SLDL  N ++G IP SL  L  L  L L  N+L+G+IP+EL+ + +L+ + +  NDL G  P S
Sbjct:  402 KLETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPAS 518

HSP 4 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 3

Query:  225 NPCTWFHI-------TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            +PC +  +       T N +  +  LDL  + L G +  ELG + +L  L L  N++ G IP +LG LK++  LDL  N  +G IP SL  L  L  + L++N L+G IP E     +      ++N LCG
Sbjct:  643 HPCNFTRVYRGITQPTFNHNGSMIFLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIP-ESAPFDTFPDYRFANNSLCG 772

HSP 5 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNL-KSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRE-LVGISSLKVVDVSSNDLCGTXPTSGPFEHIP-LNTL 644
            +++ L+L N+   G LVP+L   E LQYL L  N+ QG  P +L +L K+++ LDL  NN SG +P SL +  SL  + +++N  +G++P + L+ +S++K + +S N   G  P S  F ++P L TL
Sbjct:  282 KLSFLNLTNNQFVG-LVPKLPS-ESLQYLYLRGNDFQGVYPNQLADLCKTVVELDLSYNNFSGMVPESLGECSSLELVDISNNNFSGKLPVDTLLKLSNIKTMVLSFNKFVGGLPDS--FSNLPKLETL 406

HSP 6 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            N +  L L N+   G +   L     L  L+L  N + G+IP  LG+L  L  L L+ N +SG+IP  L  L++L  L L+ N LTG IP  L   + L  + +S+N L G  P S
Sbjct:  427 NNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPAS 542

HSP 7 Score: 67.3958 bits (163), Expect = 7.280e-11
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 3

Query:  279 LDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAK--LKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +D+ N+N SG+L V  L KL +++ + L  N   G +P    NL  L +LD+ +NN++G IP  + K  + +L  L L +N   G IP  L   S L  +D+S N L G+ P+S
Sbjct:  357 VDISNNNFSGKLPVDTLLKLSNIKTMVLSFNKFVGGLPDSFSNLPKLETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSS 470

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3

Query:  348 YLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP 632
            +L+L  N ++G+IP ELG +  L  L+L +N++SG IP  L  LK++  L L+ NR  G IP  L  ++ L  +D+S+N+L G  P S PF+  P
Sbjct:  667 FLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFP 761

HSP 2 Score: 75.0998 bits (183), Expect = 3.491e-13
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            +++  L L  + LSG +  EL  L+ L+ L L  N++ G IP  L N   L  + L NN +SG+IP SL +L +L  L+L +N ++G IP EL    SL  +D+++N L G+ P
Sbjct:  475 SKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDLNTNFLNGSIP 588

HSP 3 Score: 72.7886 bits (177), Expect = 1.733e-12
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 3

Query:  267 RVTRLDLGNSNLSGRLVPELGK--LEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            ++  LD+ ++NL+G +   + K  + +L+ L L  N  +G IP  L N   L+SLDL  N ++G IP SL  L  L  L L  N+L+G+IP+EL+ + +L+ + +  NDL G  P S
Sbjct:  402 KLETLDMSSNNLTGVIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPAS 518

HSP 4 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 3

Query:  225 NPCTWFHI-------TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            +PC +  +       T N +  +  LDL  + L G +  ELG + +L  L L  N++ G IP +LG LK++  LDL  N  +G IP SL  L  L  + L++N L+G IP E     +      ++N LCG
Sbjct:  643 HPCNFTRVYRGITQPTFNHNGSMIFLDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIP-ESAPFDTFPDYRFANNSLCG 772

HSP 5 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 3

Query:  264 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            N +  L L N+   G +   L     L  L+L  N + G+IP  LG+L  L  L L+ N +SG+IP  L  L++L  L L+ N LTG IP  L   + L  + +S+N L G  P S
Sbjct:  427 NNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPAS 542

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 3

Query:  138 NSEGDALYALRRSLSDPDNVLQSW-DPTLVNPCTWFHITCNQDNR--VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            N E   L   + S  DP   L  W + +  + C W  ITC +     V+ ++L + NLSG +   +  L +L +L+L  N     IP++L    +L +L+L +N I G IP  +++  SL  +  + N + G IP +L  + +L+V+++ SN L G  P
Sbjct:   30 NEELGNLLRFKASFDDPKGSLSGWFNTSSSHHCNWTGITCTRAPTLYVSSINLQSLNLSGEISDSICDLPYLTHLDLSLNFFNQPIPLQLSRCVTLETLNLSSNLIWGTIPDQISEFSSLKVIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIVP 188

HSP 2 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 3

Query:  276 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            +     +  SG L P       L  + +  N + G IP EL N K L+SL L  N  +G+IPPSLA L  L +L L+DN LTG IP+ L  +  L + +VS N L G  P S
Sbjct:  393 KFSASQNRFSGELPPNFCDSPVLSIVNISHNRLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNL-KLALFNVSFNGLSGEVPHS 502

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3

Query:  153 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            A+ +L  +L  P  +L  W  +  +PC  +W  + CN  ++V  + L ++NL G L   L     L+ ++   N+I G+IP  L    SL +L L  NN +G IP SL+ LKSL  + LN+N L+G+IP     +  +  +D+SSN+L G  P S
Sbjct:   40 AINSLFLALESP--LLPGWVASGGDPCGESWQGVLCNA-SQVETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLP--VSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPS 189

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 3

Query:  141 SEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            S+  AL A+R S+     +   W+ +  +PC W  + C+   RVT L L  S L G L +  +G L  L+ L L  N++ G IP +  NL  L  L L  N  SG+IP  L  L S++ + L +N+ +G+IP  +   + L  + +  N L G  P
Sbjct:   28 SDRRALLAVRNSVRGRPLL---WNMSASSPCNWHGVHCDA-GRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIP 179

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BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.567e-13
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 3

Query:  204 SWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP 632
            +W P+L     W  +TCN D+  V  L L  + L G + +  + +L +L++L L  NNI GT P  L  LK+L  L L  N  SG +P  L+  + L  L L++NR  G IP  +  ++ L  ++++ N   G  P      HIP
Sbjct:   44 NWSPSLSICTKWTGVTCNSDHSSVDALHLAATGLRGDIELSIIARLSNLRFLILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPDL----HIP 184

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 3

Query:  225 NPCTWFHITC-----------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELV-GISSLKVVDVSSNDLCGTXP 605
            N C W  I+C           N+  RV  L+LG   LSG+L   + KL+ L+ L L  N++ G+I   L NL +L  LDL +N+ SG + PSL  L SL  L + +N   G IP  L   +  ++ +D++ N   G+ P
Sbjct:   62 NCCDWVGISCKSSVSLGLDDVNESGRVVELELGRRKLSGKLSESVAKLDQLKVLNLTHNSLSGSIAASLLNLSNLEVLDLSSNDFSG-LFPSLINLPSLRVLNVYENSFHGLIPASLCNNLPRIREIDLAMNYFDGSIP 199

HSP 2 Score: 75.485 bits (184), Expect = 2.673e-13
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIP 533
            +DL  ++L+G + PE G L  L  L L  NN+ G IP  L  + SL  LDL +NN+SG IPPSL KL  L    +  N+L+G IP
Sbjct:  538 IDLSYNSLNGSIWPEFGDLRQLHVLNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIP 622

HSP 3 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = 3

Query:  252 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            CN   R+  +DL  +   G +   +G    ++YL L  NN+ G+IP EL  L +L  L L NN +SG +   L KL +L  L ++ N+ +G+IP   + ++ L      SN   G  P S
Sbjct:  178 CNNLPRIREIDLAMNYFDGSIPVGIGNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIPDVFLELNKLWYFSAQSNLFNGEMPRS 297

HSP 4 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 3

Query:  351 LELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP 632
            ++L  N++ G+I  E G+L+ L  L+L NNN+SG IP +L+ + SL  L L+ N L+G IP  LV +S L    V+ N L G  PT   F+  P
Sbjct:  538 IDLSYNSLNGSIWPEFGDLRQLHVLNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIPTGVQFQTFP 631

HSP 5 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCG 596
            V  L L ++NLSG +  EL +L +L  L L  N + G +  +LG L +L  LD+ +N  SGKIP    +L  L +     N   G++PR L    S+ ++ + +N L G
Sbjct:  208 VEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIPDVFLELNKLWYFSAQSNLFNGEMPRSLSNSRSISLLSLRNNTLSG 316

HSP 6 Score: 67.3958 bits (163), Expect = 7.280e-11
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 3

Query:  258 QDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGP 617
            Q + ++ L L N+ LSG L  +LGKL +L  L++  N   G IP     L  L      +N  +G++P SL+  +S+  L L +N L+GQI      +++L  +D++SN   G+ P++ P
Sbjct:  228 QLSNLSVLALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIPDVFLELNKLWYFSAQSNLFNGEMPRSLSNSRSISLLSLRNNTLSGQIYLNCSAMTNLTSLDLASNSFSGSIPSNLP 347

[Close]

BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 56/193 (29.02%), Postives = 84/193 (43.52%), Query Frame = 3

Query:  153 ALYALRRSLSDPD-NVLQSWDPTLVNPCTWFHITCNQDN-RVTRLDLGNSN--------------------------------------LSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            AL A + SLS+P+  +  +W         W+ I+C+ D+ RVT + L   +                                      ++G + P +  L  L+ L+L  N I G IP E+G L  L  L+L  N +SG+IP SL  L  L  L L +N +TG IP +   +  L  V +  N+L G+ P S
Sbjct:   34 ALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPES 226

HSP 2 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            LDL  + ++G +  E+GKL  L  L L +N + G IP  L +L  L  L+L  N I+G IP     LK L  + L  N LTG IP  + G+  L  +D+S N + G  P
Sbjct:  140 LDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIP 248

HSP 3 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 48/144 (33.33%), Postives = 73/144 (50.69%), Query Frame = 3

Query:  270 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL------------------------VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHI 629
            ++R+ LG + L+G +   +  +E L  L+L KN+I+G IP  +GN+K L  L+L  N+++G IP SL     L                        V L L+ N L+G+IP  L     +  +D+S N LCG  PT  PF+H+
Sbjct:  209 LSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHL 352

HSP 4 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 3

Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            L+L  + ++G +  + G L+ L  + L +N + G+IP  +  ++ L  LDL  N+I G IP  +  +K L  L L+ N LTG IP  L+  S L V ++S N L GT P
Sbjct:  188 LELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIP 296

The following BLAST results are available for this feature:

BLAST of CF417565 vs. ExPASy Swiss-Prot

BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114


Match Name	E-value	Identity	Description
PGIP_VITVI	3.158e-14	31.28	Polygalacturonase inhibitor OS=Vitis vinifera GN=p...	[more]
Y4374_ARATH	4.124e-14	32.92	Probable inactive receptor kinase At4g23740 OS=Ara...	[more]
BRI1_SOLPE	7.035e-14	41.05	Systemin receptor SR160 OS=Solanum peruvianum PE=1...	[more]
BRI1_SOLLC	7.035e-14	41.05	Brassinosteroid LRR receptor kinase OS=Solanum lyc...	[more]
Y5694_ARATH	9.188e-14	30.82	Probably inactive leucine-rich repeat receptor-lik...	[more]
SRF1_ARATH	9.188e-14	35.48	Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi...	[more]
Y3288_ARATH	1.200e-13	33.33	Probable inactive receptor kinase At3g02880 OS=Ara...	[more]
Y5332_ARATH	1.567e-13	33.79	Probable inactive receptor kinase At5g53320 OS=Ara...	[more]
PSKR1_DAUCA	2.047e-13	35.25	Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR...	[more]
DR100_ARATH	2.047e-13	29.02	DNA-damage-repair/toleration protein DRT100 OS=Ara...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_115000-495 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bp
GAGAGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCA
GTGCAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAAT
AATAGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGG
ACGCGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTT
CAGAGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAAC
CTGTAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATC
TATCCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATAC
CTGGAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGG
TAACTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGG
GGAAAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGG
CTTAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAAT
TTCAAGTCTCAAAGTTGTGGATGTTTCNAGCAATGATCTGTGTGGAACAN
TTCCTACAAGCGGACCATTTGAACACATCCCACTCAACACTTTGAGAAT