CF417565

Overview
NameCF417565
Unique NameCF417565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 55/176 (31.25%), Postives = 77/176 (43.75%), Query Frame = 3
Query:  174 SLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR----------------VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTSGPFEHIP--LNTLR 647
            SL+DP      W     +P T   I  N D R                +  L L  ++ SGR+VP LG +  LQ+L+L  N   G IP  +  L SL  L+L +N   G  P     L+ L  L L+ N + G +      + +++ VD+S N   G    S P E+I    NTLR
Sbjct:   53 SLTDPSTCPNDWPGISCDPETGSIIAINLDRRGLSGELKFSTLSGLTRLRNLSLSGNSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNG--GLSLPMENISSISNTLR 226          

HSP 2 Score: 67.0106 bits (162), Expect = 9.508e-11
Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  279 LDLGNSNLSGRL---------VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            L+L  +NL G +         +  L     ++ L+L  N++ G +P ++G ++ +  L+L NN +SG++P  L KL  L+FL L++N   GQIP +L   S +   +VS NDL G  P
Sbjct:  440 LNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLP--SQMVGFNVSYNDLSGIIP 555          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI-SSLKVVDVSSNDLCGTXP 605
            LD+ ++ L+G + P LG L  L +L    N+    IP ELG+L +L+  DL  N++SG +P  L KL  L  + + DN L+G +P +L    S L+ + +  N   G+ P
Sbjct:  205 LDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDLFSAESQLQTLVLRENGFSGSLP 314          

HSP 2 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 40/110 (36.36%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            LDL + +++G +   LG L  L+ L L +N++   +P  LG L +L  LDL  N+ +G +P S + LK+L+ L ++ N LTG IP  L  +S L  ++ SSN      P+
Sbjct:  133 LDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPS 242          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 49/147 (33.33%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  171 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPT 608
            +S +D DN L        + C W  + C Q  R+ RL L    L G      L +L+ L+ L L  N++ G IP +L +L +L SL L  N  SG  PPS+  L  L+ L ++ N  +G IP E+  +  L  +++  N   GT P+
Sbjct:   42 KSTADLDNKLLYSLTERYDYCQWRGVKCAQ-GRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPS 186          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 3
Query:  249 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            T  + +++  LDL  + ++  L  +L  L  L+ L L  N I   +P  +GN  SL +LDL  N+ISGKIP +++ L +L  L+L++N     +P ELV   SL  +D+SSN L  + P
Sbjct:   85 TIGKMSKLQTLDLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP 202          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  210 DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 488
            DP L     W  + C+  N     R+  LDL +  L+G++VP++  L  LQ L+L  N + G +P  L N+KSL+ ++L NNN+ G IP +L   K+L
Sbjct:  391 DPCLPQQFLWTGLNCSYMNMSTSPRIISLDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNL 488          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  279 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXPTS 611
            L +  + LSG   P+LG++  L  + +  N   G +P  LGNL+SL  L + +NNI+G+IP SL+ LK+L   R++ N L+G+IP  +   + L  +D+    + G  P S
Sbjct:  140 LAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPAS 250          

HSP 2 Score: 68.5514 bits (166), Expect = 3.268e-11
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 3
Query:  267 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPV-----------------------ELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            RVT + L   NL G + PE G L  L  ++L  N + GTIP                        +LG + +L  + + +N  +G++PP+L  L+SL  L ++ N +TG+IP  L  + +L    +  N L G  P
Sbjct:   89 RVTNIQLRGFNLRGIIPPEFGNLTRLTEIDLVLNFLSGTIPTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIP 224          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 3
Query:  204 SW--DPTLVNPCTWFHITCNQDNR-----VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 488
            SW  DP +     W  + C   +      +T LDL +S L+G +   +  L HLQ L+L  NN+ G +P  L ++KSL+ ++L  NN+SG +PPSL + K +
Sbjct:  375 SWQGDPCVPKQLLWDGLNCKNSDISTPPIITSLDLSSSGLTGIITQAIKNLTHLQILDLSDNNLTGEVPEFLADIKSLLVINLSGNNLSGSVPPSLLQKKGM 476          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  249 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            T  + +++  LDL N+ +S  L  +   L  L+ L L  N I G+    +GN   L  LD+  NN SG IP ++  L SL  L+L+ N     IPR L+G  SL  +D+SSN L G+ P
Sbjct:   87 TIGKLSKLQSLDLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP 204          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3
Query:  252 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSN-----DLCGT 599
            CN   R+ RL    ++ +G +      L+ L  L+L +N+  GT+P   G+L SL+ LDL NN + G +P  L  LK+L  L L +NR +G + + +  I SL  + +S+N     D+ GT
Sbjct:  188 CNL-KRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEEDMVGT 307          
BLAST of CF417565 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 43/126 (34.13%), Postives = 60/126 (47.62%), Query Frame = 3
Query:  228 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTXP 605
            PCTW  + C +  RVT L L    LSG L   +G L  L+ L    N + G +P +  NL  L  L L  N  SG+IP  L  L +++ + L  N   G+IP  +   + L  + +  N L G  P
Sbjct:   52 PCTWGGVQC-ESGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIP 176          
The following BLAST results are available for this feature:
BLAST of CF417565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
Y5020_ARATH2.956e-1231.25Probable inactive receptor kinase At5g10020 OS=Ara... [more]
Y2165_ARATH2.956e-1235.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5720_ARATH5.042e-1233.33Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y5815_ARATH6.585e-1236.97Probably inactive leucine-rich repeat receptor-lik... [more]
Y5169_ARATH6.585e-1237.76Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.600e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH8.600e-1236.27Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH8.600e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]
PII2_ARATH8.600e-1234.71Piriformospora indica-insensitive protein 2 OS=Ara... [more]
Y5659_ARATH1.123e-1134.13Probable inactive receptor kinase At5g16590 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-495 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417565 ID=CF417565; Name=CF417565; organism=Citrus sinensis; type=EST; length=649bp
GAGAGAGAGAGAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCA
GTGCAGTGGTTGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAAT
AATAGGGAGCAGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGG
ACGCGCTGTACGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTT
CAGAGCTGGGATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAAC
CTGTAATCAGGACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATC
TATCCGGCCGTCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATAC
CTGGAACTTTACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGG
TAACTTGAAGAGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGG
GGAAAATCCCTCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGG
CTTAACGATAATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAAT
TTCAAGTCTCAAAGTTGTGGATGTTTCNAGCAATGATCTGTGTGGAACAN
TTCCTACAAGCGGACCATTTGAACACATCCCACTCAACACTTTGAGAAT
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