CF417566

Overview
NameCF417566
Unique NameCF417566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417566 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:  559 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADD 663
            MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D
Sbjct:  168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAED 202
The following BLAST results are available for this feature:
BLAST of CF417566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB2A_SOLLC8.573e-1394.29Chlorophyll a-b binding protein 1A, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-496 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417566 ID=CF417566; Name=CF417566; organism=Citrus sinensis; type=EST; length=683bp
CTCTTGCTTACACAGCTTCTCTTGCTTACCCAGCTTCTGCTTCTCAATTA
AATTCCTCAATGGCAACCTCAACAATGGCTCTCTCCTCATCATTCGTCGG
CAAGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCAATGGTGGCC
GCATCTCCATGCGTAAAACCGCGAGCAAGTCTGTTTCTTCAGGTAGCCCG
TGGTACGGCCCAGACAGAGTCAAGTACTTGGGCCCATTCTCTGGCGAGCC
CCCAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTTGGGACACAG
CCGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCGAA
GTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCC
GGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCGTGTGGTTCA
AGGCGGGAGCCCAGATCTTCAGCGAGGGCGGGCTAGACTACTTGGGAAAC
CCAAGCTTGATCCACGCCCAGAGCATCTTGGCCATCTGGGCTTGCCAGGT
GGTCTTGGATGGGAGCCGTTGAGGGTTACAGAATTGCTGGAGGGCCGCTC
GGTGAAGTGACTGACCCATTGTACCCAGGTGGCAGCTTTGATCCATTGGG
TTTGGCTGATGACCGGAGGCTTTTGCTGAGCTC
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