CF417572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_ALKOO (10 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.081e-18 Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 220 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 +IKPLGDRV++K EE T GI LP +A+ +PQ EV+AVG G + ++ + VK G +VI+SKYAGTE++F+G + IL++ D++ ++E Sbjct: 2 NIKPLGDRVVIKRVEAEETTKSGIVLPGSAKEQPQLAEVMAVGPGGVIEGKEVVMEVKVGDKVIFSKYAGTEVKFDGVEYTILKQSDILAVVE 94
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_THET8 (10 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groS PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 217 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 T IKPLGDRV+VK E KT GGI LP TA+ KPQ G+V+AVG G+ + ++ + VK G V+++KY GTE+E +G ++IL E D++ +L+ Sbjct: 7 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 101
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_THET2 (10 kDa chaperonin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=groS PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 217 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 T IKPLGDRV+VK E KT GGI LP TA+ KPQ G+V+AVG G+ + ++ + VK G V+++KY GTE+E +G ++IL E D++ +L+ Sbjct: 7 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 101
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_COPPD (10 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 45/92 (48.91%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 IKPLGDRVL+K EEKT GI +P TA+ KPQ G+V+AVG G+T+ T++ + V+ G V++SKYAGTE++ +G +LI+ E D++ ++ Sbjct: 3 IKPLGDRVLLKPMEEEEKTKSGIVIPDTAKEKPQKGKVLAVGTGRTLDNGTRVPLEVQVGDIVVFSKYAGTEVKVDGEEYLIVSERDILAVV 94
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_CHLTE (10 kDa chaperonin OS=Chlorobium tepidum GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 220 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 ++KPL DRV+VK EEKT GG+++P T + KP GEVVAVG GK + + + VK G +V+Y KY+GTE+ G ++LI+RE D+ IL Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGPGKVSDAGQVVAMQVKAGDKVLYGKYSGTEVHVEGEDYLIMRESDIFAIL 94
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_BACP2 (10 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + V G ++I+SKYAGTE+++ G +LILRE D++ ++ Sbjct: 2 LKPLGDRVIIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVNTGDRIIFSKYAGTEVKYEGKEYLILRESDILAVI 93
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_ALKMQ (10 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 220 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 +IKPLGD+V++K E+KT GI LP +A+ +PQ EVVAVG G V ++ + +K G +VI+SKYAGTE++ +G + ILR++D++ ++E Sbjct: 2 NIKPLGDKVVIKKVEAEDKTKSGIVLPGSAKEQPQMAEVVAVGPGGVVEGKEIIMELKVGDKVIFSKYAGTEVKLDGEEYTILRQNDILAVVE 94
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_LACZE (10 kDa chaperonin OS=Lactobacillus zeae GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 492 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G ++L+L E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_LACCB (10 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 492 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G ++L+L E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_LACC3 (10 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 492 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G ++L+L E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92 The following BLAST results are available for this feature:
BLAST of CF417572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417572 ID=CF417572; Name=CF417572; organism=Citrus sinensis; type=EST; length=562bpback to top |