CF417572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_LACH4 (10 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 492 ++P+GDRV+VK+K EEKT GGI L S A+ KP GEVVAVGEG K+ +SVK G V+Y +Y+GT +E+ G +L+L E D++ I Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_GEOTN (10 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDR+++++ EEKT GI LP TA+ KPQ G VVAVG G+ + ++ V+ G ++I+SKYAGTE++++G +LILRE D++ ++ Sbjct: 2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_GEOSW (10 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDRV++++ EEKT GI LP TA+ KPQ G VVAVG+G+ + + + V+ G ++I+SKYAGTE++++G +LILRE D++ ++ Sbjct: 2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGECVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_GEOKA (10 kDa chaperonin OS=Geobacillus kaustophilus GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDR+++++ EEKT GI LP TA+ KPQ G VVAVG G+ + ++ V+ G ++I+SKYAGTE++++G +LILRE D++ ++ Sbjct: 1 MKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 92
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_BACSU (10 kDa chaperonin OS=Bacillus subtilis GN=groS PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + VK G ++I+SKYAGTE+++ G +LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_BACA2 (10 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19 Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + VK G ++I+SKYAGTE+++ G +LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_TETHA (10 kDa chaperonin OS=Tetragenococcus halophilus GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 +KPLGDRVL+++ EEKT GGI L STAQ KPQ G+VVAVG G+T+ +L + V G V++ KYAG+E++++G +++I D+V I+E Sbjct: 2 LKPLGDRVLIEVSEEEEKTVGGIVLASTAQEKPQTGKVVAVGPGRTLDNGELATVPVNVGDTVLFEKYAGSEVKYDGQDYMIFSAKDLVAIVE 94
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19 Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 217 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 486 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK T + VK G +V+YSKYAGT+++ G ++++L E D++ Sbjct: 9 STVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDIL 99
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_PELPD (10 kDa chaperonin OS=Pelobacter propionicus (strain DSM 2379) GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 223 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 498 ++PL DR+LVK E KT GG+F+P TA+ KPQ GEVVA G GK K L + VK G +V++ KY+GTE++ +G + L++REDD++ ++E Sbjct: 3 LRPLHDRILVKRVEEETKTAGGLFIPETAKEKPQRGEVVAAGNGKKTEDGKVLPLDVKVGDKVLFGKYSGTEVKVDGEDFLMMREDDILAVVE 95
BLAST of CF417572 vs. ExPASy Swiss-Prot
Match: CH10_NOSP7 (10 kDa chaperonin OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19 Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 217 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 495 +++KPL DRV VK+ EEKT GG++LP TA+ KPQ GEVVA+G GK ++ ++ +K G +V+YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CF417572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417572 ID=CF417572; Name=CF417572; organism=Citrus sinensis; type=EST; length=562bpback to top |