CF417578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_KLULA (40S ribosomal protein S1 OS=Kluyveromyces lactis GN=RPS1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.758e-37 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 572 NQVKRT YAQ+ I QIR+ + EI+ + L L I EVI +EIE AT I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 148 NQVKRTSYAQSSHIRQIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLLSLHGEASAEEKGKKV 244 HSP 2 Score: 75.485 bits (184), Expect = 3.758e-37 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + V GK +LT F GM+FTTDKL S+VR W TLIEA V VKT+D++ LR+F I FT Sbjct: 83 KVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.377e-37 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 258 ALDSPXRLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVD 575 AL R NQVK+T YAQ+ ++ ++R+KM EIM ++ L L I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ E+ G KV+ Sbjct: 139 ALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGESGGEEKGRKVN 245 HSP 2 Score: 68.1662 bits (165), Expect = 6.377e-37 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 2 Query: 92 IXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 + L + V GK +LT F G++FT+DKL SLVR W +L+EA V VKT D++ LR+F + FT Sbjct: 84 VKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.378e-37 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 3 Query: 282 PNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 572 PNQVK+TCYAQ+ I IR+ EI+ + L I EVI +E+E AT I+PLQNV +RKVK+LK PKFDLG LM +HG+ S++ G KV Sbjct: 147 PNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKV 243 HSP 2 Score: 70.4774 bits (171), Expect = 6.378e-37 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 KI L + V GK +LT GM+FTTDK S+VR W TLIEA V VKT+D + +R+F I FT Sbjct: 83 KIKLRVDEVQGKNLLTNIHGMDFTTDKYRSMVRKWQTLIEAQVTVKTSDEYVIRVFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.623e-37 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 294 KRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPXDXPMP 599 ++TCYAQ Q+ IR+KM EI+ + +L+ +V I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP P Sbjct: 154 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERPEGYEPP 258 HSP 2 Score: 78.5666 bits (192), Expect = 6.623e-37 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K L AE V G+ VL F GM+ TTDKL +V+ W TLIEA +DVKTTD + LR+FCIGFT + S Sbjct: 86 KFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 150 HSP 3 Score: 25.409 bits (54), Expect = 6.623e-37 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 1 KIASEGLKHXVFE-SITSVIFSTEEEHAY 84 KIASEGLK VFE S+ + T+ E ++ Sbjct: 56 KIASEGLKGRVFEVSLADLQADTDAERSF 84
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.118e-36 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 294 KRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV---------GVKVDRPXDXPMP 599 ++TCYAQ QI IR++M I+ + DLK +VE + + I ++IEKA +YPL +VFIRKVK+LK P+FDL L+E+HGD GV VDRP P Sbjct: 154 RKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVFIRKVKVLKKPRFDLSSLLELHGDGGGKAAEVSTGAASGVVVDRPEGYEPP 264 HSP 2 Score: 79.7221 bits (195), Expect = 1.118e-36 Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K L AE V G+ VL F GM+ TTDKL S+V+ W TLIE VDVKTTD + LR+FCIGFT + S Sbjct: 86 KFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDS 150 HSP 3 Score: 21.1718 bits (43), Expect = 1.118e-36 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 1 KIASEGLKHXVFE 39 +IAS+GLK VFE Sbjct: 56 RIASDGLKGRVFE 68
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.119e-36 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 294 KRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPXDXPMP 599 ++TCYAQ Q+ IR+KM EI+ + +L+ +V I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP P Sbjct: 154 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKGEAGDKSERPEGYEPP 258 HSP 2 Score: 78.5666 bits (192), Expect = 1.119e-36 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K L AE V G+ VL F GM+ TTDKL +V+ W TLIEA +DVKTTD + LR+FCIGFT + S Sbjct: 86 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 150 HSP 3 Score: 25.409 bits (54), Expect = 1.119e-36 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 1 KIASEGLKHXVFE-SITSVIFSTEEEHAY 84 KIASEGLK VFE S+ + T+ E ++ Sbjct: 56 KIASEGLKGRVFEVSLADLQADTDAERSF 84
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.454e-36 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 294 KRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKVDRPXDXPMP 599 ++TCYAQ Q+ IR+KM EI+ + +L+ +V I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP P Sbjct: 154 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERPEGYEPP 259 HSP 2 Score: 77.7962 bits (190), Expect = 1.454e-36 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K L AE V G+ VL F GM+ TTDKL +V+ W TL+EA +DVKTTD + LR+FCIGFT + S Sbjct: 86 KFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFCIGFTNKDS 150 HSP 3 Score: 25.409 bits (54), Expect = 1.454e-36 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 1 KIASEGLKHXVFE-SITSVIFSTEEEHAY 84 KIASEGLK VFE S+ + T+ E ++ Sbjct: 56 KIASEGLKGRVFEVSLADLQADTDAERSF 84
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.837e-36 Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 572 NQVKRT YAQ+ I IR+ + EI+ L L I EVI +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV Sbjct: 148 NQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKV 244 HSP 2 Score: 75.485 bits (184), Expect = 1.837e-36 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 KI L + V GK +LT F GM+FTTDK+ S+VR W TLIEA V VKT+D++ LR+F I FT + S Sbjct: 83 KIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQS 147
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_THEPA (40S ribosomal protein S3a OS=Theileria parva GN=TP03_0697 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.890e-36 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 557 R P Q+K TCY +T ++ I +KM +M A++ LK LV+ I E IG+EIEKA SI+PLQNV +RK+K+LK PKFDL KLME H +YS D Sbjct: 145 RRPGQLKSTCYVRTSKVRLIHKKMVSVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESH-NYSGD 237 HSP 2 Score: 69.707 bits (169), Expect = 1.890e-36 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETSKPG 292 KI L+ E V G+ LT F G + T DKL SL+R ++LIEA+ DVKT D + LRLFC+G+T +PG Sbjct: 83 KIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRLFCVGYTKR--RPG 148 HSP 3 Score: 22.7126 bits (47), Expect = 1.890e-36 Identity = 11/28 (39.29%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 1 KIASEGLKHXVFESITSVIFSTEEEHAY 84 K+A++GLK VFE ++ + +E+ AY Sbjct: 55 KLATDGLKGRVFE-MSLADLNADEDQAY 81
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.059e-36 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 572 R NQ+K+T YAQ+ I IR+ + EI+ + L L I EVI +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G KV Sbjct: 145 RQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGESSGEEKGKKV 244 HSP 2 Score: 74.3294 bits (181), Expect = 4.059e-36 Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K+ L + V GK +LT F G++FTTDKL S+VR W TLIEA V VKT D++ LR+F I FT S Sbjct: 83 KVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQS 147 The following BLAST results are available for this feature:
BLAST of CF417578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417578 ID=CF417578; Name=CF417578; organism=Citrus sinensis; type=EST; length=652bpback to top |