CF417578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A2_LEIIN (40S ribosomal protein S3a-2 OS=Leishmania infantum GN=LinJ35.0510 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.419e-20 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ T + V G+ +LT F M TTDK+ SL+R W T +E V+VKT D +T+RLF + FT Sbjct: 86 KVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFT 146 HSP 2 Score: 53.1434 bits (126), Expect = 4.419e-20 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 542 NQ R CYA+ + +R ++ +++ + +K V V+ + + + I PL+ + IRKV++++ PKFD L+ HG Sbjct: 151 NQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.419e-20 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ T + V G+ +LT F M TTDK+ SL+R W T +E V+VKT D +T+RLF + FT Sbjct: 86 KVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFT 146 HSP 2 Score: 53.1434 bits (126), Expect = 4.419e-20 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 542 NQ R CYA+ + +R ++ +++ + +K V V+ + + + I PL+ + IRKV++++ PKFD L+ HG Sbjct: 151 NQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A2_TRYCR (40S ribosomal protein S3a-2 OS=Trypanosoma cruzi GN=Tc00.1047053511001.9 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.420e-20 Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K+ + V G+ +LT F M T+D++ L+R W T IEA V+ KT D +TLRLF I FT + S Sbjct: 85 KVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFVIAFTKKQS 149 HSP 2 Score: 56.6102 bits (135), Expect = 4.420e-20 Identity = 28/110 (25.45%), Postives = 56/110 (50.91%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKVDRPXDXPMPEA 605 NQ+ + CYA+T + +R ++ ++ + ++ V ++ + K + I PL+++ IRKVK+++ P+FD L+ HG+ +E V+ + P EA Sbjct: 150 NQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.420e-20 Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETS 283 K+ + V G+ +LT F M T+D++ L+R W T IEA V+ KT D +TLRLF I FT + S Sbjct: 85 KVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFVIAFTKKQS 149 HSP 2 Score: 56.6102 bits (135), Expect = 4.420e-20 Identity = 28/110 (25.45%), Postives = 56/110 (50.91%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY---SEDVGVKVDRPXDXPMPEA 605 NQ+ + CYA+T + +R ++ ++ + ++ V ++ + K + I PL+++ IRKVK+++ P+FD L+ HG+ +E V+ + P EA Sbjct: 150 NQLSKNCYAKTRLVKWVRHRITNLIRQRLSKVNINEAVTLLTRNILRDRLAKRCNPIVPLRDLRIRKVKVVRTPRFDAQALLNAHGEIPASAEGEARVVEEAQEAPAAEA 259
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_LEIBR (40S ribosomal protein S3a OS=Leishmania braziliensis GN=LbrM34_V2.0430 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.476e-20 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ T + V G+ +LT F M TTDK+ SL+R W T +E V+V+T D +T+RLF + FT Sbjct: 86 KVRFTVQEVQGRNLLTQFHSMEMTTDKMASLLRKWCTTMETTVEVRTADGYTMRLFVVAFT 146 HSP 2 Score: 53.1434 bits (126), Expect = 7.476e-20 Identity = 24/86 (27.91%), Postives = 45/86 (52.33%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHG 542 NQ R CYA+ + +R ++ +++ + +K V V+ + + + I PL+ + IRKV++++ PKFD L+ HG Sbjct: 151 NQQSRNCYAKQRLVKWLRMRVTKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPIVPLREMRIRKVRVVRTPKFDAQALLNAHG 236
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_ENCCU (40S ribosomal protein S1 OS=Encephalitozoon cuniculi GN=RPS1 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.984e-17 Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKA 503 R P VK+TCY + +IR+ M +++ + CD++ +++ E +G+ IE+ S I+PLQN +RKVK +K+ Sbjct: 97 RHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKS 172 HSP 2 Score: 45.8246 bits (107), Expect = 6.984e-17 Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 2 Query: 113 VXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 + G + F GM T+DK ++++ WHTLIEA D+ D R+F +G T Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVT 95
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.979e-16 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 545 + P + Y +T + +IR+ M +++ DL +++ AEVIG+ +EK S IYPLQN + KVK +K K D ME+ + Sbjct: 147 KTPTCTSKRVYCKTSEEKKIRKVMFDVIEEELKGEDLNKIMKKLAAEVIGKSVEKKGSLIYPLQNCCVIKVKTVKRGK-DTSNAMEIEAN 235 HSP 2 Score: 50.8322 bits (120), Expect = 1.979e-16 Identity = 25/64 (39.06%), Postives = 34/64 (53.12%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXET 280 K V GK + F GM+ T+DK+ ++R WHTLIEA D+ D LR+F T +T Sbjct: 85 KFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVNAVTKKT 148
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_GUITH (40S ribosomal protein S3a OS=Guillardia theta PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 2.342e-13 Identity = 25/74 (33.78%), Postives = 39/74 (52.70%), Query Frame = 2 Query: 68 KKSMLTVKIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFTXETSKP 289 K+ ++ + + T F G+ T DK+ SL++ WHTLIE V+ KT D + L+LF I ++ KP Sbjct: 72 KEEFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIA---QSKKP 142 HSP 2 Score: 43.1282 bits (100), Expect = 2.342e-13 Identity = 20/72 (27.78%), Postives = 39/72 (54.17%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 500 N +T Y + Q +RR++ +I++ + D+K + + I +IE S I+P+ V IRK+K+++ Sbjct: 144 NMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215 The following BLAST results are available for this feature:
BLAST of CF417578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417578 ID=CF417578; Name=CF417578; organism=Citrus sinensis; type=EST; length=652bpback to top |