CF417578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_NEUCR (40S ribosomal protein S1 OS=Neurospora crassa GN=crp-8 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.973e-43 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDR 578 R PNQVK+T YA + QI IRRKM EI+ A+SC L L I EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG LM +HG+ S++ G KV+R Sbjct: 145 RRPNQVKKTTYAASSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGALMSLHGESGSDEAGQKVER 246 HSP 2 Score: 73.9442 bits (180), Expect = 3.973e-43 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + + GK LT F G++FT+DKL SLVR W TLIEA + VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_CHAGB (40S ribosomal protein S1 OS=Chaetomium globosum GN=RPS1 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.746e-43 Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDR 578 R PNQ+K+T YA T QI IRRKM EI+ A+SC L L I EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG LM +HG+ S D G KV+R Sbjct: 145 RRPNQIKKTTYAATSQIRAIRRKMTEIIQREASSCTLTQLTSKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGALMTLHGESSTDEQGQKVER 246 HSP 2 Score: 72.7886 bits (177), Expect = 6.746e-43 Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 KI L + V GK LT F G++FT+DKL SLVR W TLIEA V V TTD++ LRLF I FT Sbjct: 83 KIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVMTTDHYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_EMENI (40S ribosomal protein S1 OS=Emericella nidulans GN=rps1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.791e-43 Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDR 578 R PNQ+K+T YA++ QI IR+KM EIM A+SC L L I EVIGREIEKAT IYPLQ+V IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R Sbjct: 145 RRPNQIKKTTYARSSQIRAIRKKMTEIMQREASSCSLAQLTSKLIPEVIGREIEKATQGIYPLQHVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGQKVER 246 HSP 2 Score: 74.3294 bits (181), Expect = 8.791e-43 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + + GK LT F G++FTTDKL SLVR W +LIEA V VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_TALSN (40S ribosomal protein S1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.535e-42 Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDR 578 R PNQ+K+T YA++ QI IR+KM EI+ AASC L L I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R Sbjct: 145 RRPNQIKKTTYARSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVER 246 HSP 2 Score: 73.1738 bits (178), Expect = 2.535e-42 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + V GK LT F G++FT+DKL SLVR W +LIEA V VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.535e-42 Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDR 578 R PNQ+K+T YA + QI IRRKM +I+ A+SC L L I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG LM +HG+ ++D G KV+R Sbjct: 145 RRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVER 246 HSP 2 Score: 73.9442 bits (180), Expect = 2.535e-42 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + V GK LT F G++FT+DKL SLVR W TLIEA V VKTTD++ +RLF I FT Sbjct: 83 KVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_IXOSC (40S ribosomal protein S3a OS=Ixodes scapularis PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.917e-42 Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 285 NQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKVDRPXDXPMPEAXT 611 NQ+K+TCYAQ Q+ IR+KM E+MV +S +LK +V I IG++IEK+ IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + GVKVDRP P T Sbjct: 148 NQLKKTCYAQHNQVRLIRKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSCQHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRPEGYEPPVLET 269 HSP 2 Score: 81.6481 bits (200), Expect = 2.917e-42 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K L AE V G+ VLT F GM+ TTDKL S+V+ W TLIEA VDV+TTD + LR+FCIGFT Sbjct: 83 KFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIGFT 143 HSP 3 Score: 23.8682 bits (50), Expect = 2.917e-42 Identity = 16/28 (57.14%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 1 KIASEGLKHXVFESITSVIFSTEEEHAY 84 KIASEGLK VFE S T E AY Sbjct: 56 KIASEGLKGRVFE--VSQADLTNGEDAY 81
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_PENMQ (40S ribosomal protein S1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.608e-42 Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDR 578 R PNQ+K+T YA + QI IR+KM EI+ AASC L L I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R Sbjct: 145 RRPNQIKKTTYAGSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVER 246 HSP 2 Score: 73.1738 bits (178), Expect = 5.608e-42 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + V GK LT F G++FT+DKL SLVR W +LIEA V VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_PENCW (40S ribosomal protein S1 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.608e-42 Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDR 578 R PNQ+K+T YA++ QI IR+KM EI+ A++C L L I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R Sbjct: 145 RRPNQIKKTTYARSSQIRAIRKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVER 246 HSP 2 Score: 73.9442 bits (180), Expect = 5.608e-42 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + + GK LT F G++FTTDKL SLVR W +LIEA + VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_MAGGR (40S ribosomal protein S1 OS=Magnaporthe grisea GN=RPS1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.522e-42 Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDR 578 R PNQ+K+T YA + QI IRRKM EI+ A++C L+ L I EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ + D G KV+R Sbjct: 145 RRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTTDEQGQKVER 246 HSP 2 Score: 73.559 bits (179), Expect = 9.522e-42 Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 KI L + V GK LT F G++FT+DKL SLVR W +LIEA V VKTTD++ LRLF I FT Sbjct: 83 KIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFT 143
BLAST of CF417578 vs. ExPASy Swiss-Prot
Match: RS3A_SCLS1 (40S ribosomal protein S1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.241e-41 Identity = 61/102 (59.80%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 276 RLPNQVKRTCYAQTXQITQIRRKMREIMVAXAASCDLKSLVEXFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDR 578 R PNQ+K+T YA + QI IR+KM EI+ A++C L L I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R Sbjct: 145 RRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVER 246 HSP 2 Score: 72.7886 bits (177), Expect = 1.241e-41 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 2 Query: 89 KIXLTAEXVXGKXVLTXFWGMNFTTDKLXSLVRXWHTLIEAYVDVKTTDNFTLRLFCIGFT 271 K+ L + V GK LT F G++FT+DKL SLVR W +LIEA + VKTTD++ LRLF I FT Sbjct: 83 KVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIAFT 143 The following BLAST results are available for this feature:
BLAST of CF417578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417578 ID=CF417578; Name=CF417578; organism=Citrus sinensis; type=EST; length=652bpback to top |