CF417582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.051e-40 Identity = 82/214 (38.32%), Postives = 134/214 (62.62%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + + A+HSQ +++ PG+++V+ + +AKGL+K+AIR NPV++ E+ L+Y + +P E +++ + +A++ R G HVTI+ +SR H + Sbjct: 37 EAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCL 250
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.569e-40 Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYS 642 ++ + EALR+ ++EEM RD V V+GE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + AF+ I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPV+ E+ +LY +P +A+++R G VTI+T+S Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFDVPKTIEPIPFGQAKILREGSSVTIVTFS 209
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.018e-39 Identity = 85/203 (41.87%), Postives = 126/203 (62.07%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPD-EEYICNLEEAEMVRPGEHVTILTY 639 EALR+ + EEM + V VMGE+V Y G+YKVT+GL ++G RV+DTPI E+ F G+G+GAAMTGLRPIVE M F + A +QI N+ Y SGGQ ++ A+HSQ +++ IPG+++V T +AKGL+KAAIR NPVI E+ +LY +P ++++ + +A + R G+ T++++ Sbjct: 142 EALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRTGKDATLVSF 344
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.018e-39 Identity = 80/219 (36.53%), Postives = 135/219 (61.64%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 +L + EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y S G + A+HSQ +++ PG+++V+ +AKGL+K+AIR +NPV++ E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H + Sbjct: 32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCL 250
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.329e-39 Identity = 82/208 (39.42%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSR 645 +AL + ++EE+ RD V +MGE+V Y G+YK++KGL K+GD RV+DTPI E F G+ +GAA GLRPI E M F + A +QI N+ +Y S G+ + A+HSQ +++ PG+++V + +AKGL+KAAIR +NPV+ E+ +LY + DE +++ + +A++ R G+HVTI++YSR Sbjct: 29 DALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSR 236
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.268e-39 Identity = 80/219 (36.53%), Postives = 134/219 (61.19%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 +L + EA+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y S G + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H + Sbjct: 32 QLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCL 250
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYS 642 ++ + EALR+ ++EEM RD V VMGE+V Y G+YKVT+GL +++G RV+DTPI E F G+ +GAA GLRPIVE M F + A + I N+ HY SGGQ ++ A+HSQ + + IPG+++VA + + KGLM AIR +NPVI E+ +LY I + +A++++ G+ VTI+T+S Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFDISENVEPIPFGKAKVLKEGDSVTIVTFS 209
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 79/214 (36.92%), Postives = 132/214 (61.68%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 +A+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E +++ + +A++ R G H+T++++SR H + Sbjct: 37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCL 250
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 79/214 (36.92%), Postives = 132/214 (61.68%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVM 663 +A+ +G++EE++RD V ++GE+V Y G+YKV++GL KYGD R++DTPI+E F G+ +GAAM GLRPI E M F + A +Q+ N+ +Y SGG + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E +++ + +A++ R G H+T++++SR H + Sbjct: 37 DAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCL 250
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.052e-39 Identity = 83/207 (40.10%), Postives = 125/207 (60.39%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLE---EAEMVRPGEHVTILTYSR 645 EAL + EE+DRD V ++GE+V Y G+YKV+KGL D++G+ RV+DTPI E FTG+ +GAA+ GL+PIVE M+ F + A + + N+ HY SGG +GA+HSQ ++ SIPG++++ + +A+GL+KAAIR NPV+ E+ LLY I +E +A++ R G ++I+TY+R Sbjct: 43 EALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPYKAKIEREGTDISIVTYTR 249 The following BLAST results are available for this feature:
BLAST of CF417582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417582 ID=CF417582; Name=CF417582; organism=Citrus sinensis; type=EST; length=663bpback to top |