CF417582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35 Identity = 72/211 (34.12%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ I+ + SGG T H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.859e-35 Identity = 75/207 (36.23%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTY 639 + L EA+ + +++ M++D + V GED G GG ++VT GL KYG+ RV DTPIAE++ G +G A+ GL+PI E GF+ + + + + S GQFT + HS+ LE F SIPG+++V STPY+AKGL+ AAI +PV+ E +Y K+ +P E Y + +A++V+ G +T++ + Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQEVPAEMYEIPIGKAKVVKQGTDMTVVAW 210
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.196e-34 Identity = 73/211 (34.60%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 19 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 ++ + +A+ + L E+ DP+V + GEDVG GG ++ T+GL ++G+ RV DTP+AE+ G+ IG A+ G RP+ E GF+ + I + Y +GG++ HS LE PG+++V STPY+AKGL+ +AIR +PVI EH+ LY + ++ +P+ EY + +A++ R G+ +TI+ Y M Sbjct: 3 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAM 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.172e-33 Identity = 79/203 (38.92%), Postives = 112/203 (55.17%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTY 639 EAL ++ ++RD +V + G+D G GG ++ TKGL KYG RV D PIAENS G+G+GAA+ GL+PIVE GF A QI + + S G +T + HS+ LE+ + I G++ V S PY+ KGL AAI S +PVI FE LY ++ IP + Y + EA ++ G +TI++Y Sbjct: 10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAPLVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSY 212
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.172e-33 Identity = 82/204 (40.20%), Postives = 112/204 (54.90%), Query Frame = 1 Query: 28 LFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAE-HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTIL 633 LF+A+ G++ M +D V GEDVG +GG ++ T GL DKYG RV +TP+ E G IG A G PI E ++ AF+QI N Y SGGQF G HSQ ESYF PG+++V STP AKGL+ A+IR ++PVI FE L+Y + E +P +Y L +A +V+ G+ +TI+ Sbjct: 51 LFQAINNGMDIAMQKDSKAVVFGEDVG-FGGVFRCTVGLRDKYGASRVFNTPLCEQGIAGFAIGLAAQGATPIAEIQFADYIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSPYGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKDITII 253
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.205e-32 Identity = 79/228 (34.65%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-----------------LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRY 654 + + +ALR ++ ++RD V V G+DVG++GG ++ T+GL KYG RV D PI+E+ G +G GLRP+VE ++ A +Q+ + L Y S G F G HSQ E+ F + G++ V S PY+AKGL+ A I +++PVI E LYN ++PD Y L++A +VRPG +T+LTY M Y Sbjct: 17 MTMIQALRSAMDIMLERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVY 244
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.056e-32 Identity = 79/216 (36.57%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGH------------YGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSR 645 +A+ E ++ M +D +V ++GEDV +GG VTKGL ++G RVLDTPI+E + G + AA TGLRPI E M F+ F+Q+ N Y GG+ + A+HSQ L F SIPG++ V S PY+AKGL+ AAI +PV FE YN+K +P++ Y L +A++ R G VT+ + Sbjct: 9 DAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQVPITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMKGEVPEDYYTIPLGKADIKREGNDVTLFAVGK 224 The following BLAST results are available for this feature:
BLAST of CF417582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417582 ID=CF417582; Name=CF417582; organism=Citrus sinensis; type=EST; length=663bpback to top |