CF417582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.685e-32 Identity = 75/203 (36.95%), Postives = 114/203 (56.16%), Query Frame = 1 Query: 34 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTY 639 EAL ++ ++RDP+V + G+D G GG ++ TKGL KYG+ RV D PIAE + G+G+GAA+ GL+PIVE GF A QI + + S G +T + HS+ LE+ + I G++ V S PY+ KGL AA+ S +PV+ FE LY ++ IP + Y + +A ++ G ++TI++Y Sbjct: 11 EALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCPIIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQGNNLTIVSY 213
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32 Identity = 78/228 (34.21%), Postives = 115/228 (50.44%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-----------------LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRY 654 + + +ALR ++ ++RD +V V G+DVG++GG ++ T+GL KYG RV D PI+E+ G +G GLRP+VE + A +QI + L Y S G+F G HSQ E+ F + G++ V S PY+AKGL+ A+I ++PVI E LYN +PD Y L++A + RPG V++LTY Y Sbjct: 6 MTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVY 233
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.969e-31 Identity = 77/212 (36.32%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 10 QGHELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTY 639 Q ++ LF+A+ L+ + +DP + GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + Sbjct: 67 QTQKMNLFQAVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYNIPLSQAEVIQEGSDVTLVAW 277
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 6.613e-31 Identity = 76/212 (35.85%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 10 QGHELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTY 639 Q ++ LF+++ L+ + +DP + GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + Sbjct: 65 QTQKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAW 275
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.613e-31 Identity = 76/212 (35.85%), Postives = 113/212 (53.30%), Query Frame = 1 Query: 10 QGHELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTY 639 Q ++ LF+++ L+ + +DP + GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + Sbjct: 65 QTQKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAW 275
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.128e-30 Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 10 QGHELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTY 639 Q ++ LF+++ L+ + +DP + GEDV +GG ++ T GL DKYG RV +TP+ E G GIG A+TG I E ++ AF+QI N Y SG F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E +P E Y L +AE+++ G VT++ + Sbjct: 67 QTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAW 277
BLAST of CF417582 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28 Identity = 72/209 (34.45%), Postives = 110/209 (52.63%), Query Frame = 1 Query: 22 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRM 648 L + +AL GL + + DP V ++GEDVG GG ++VT+GL ++G RV+DTP+AE G IG AM G RP+VE GF+ F+QI+ + G + H + E+YF G+++VA STP++A +++ AI S++PVI FE + Y K + E L + +VR G TI+ ++ M Sbjct: 17 LPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSMPVVIRIPHGGHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRYWPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGM 225 The following BLAST results are available for this feature:
BLAST of CF417582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417582 ID=CF417582; Name=CF417582; organism=Citrus sinensis; type=EST; length=663bpback to top |