CF417586

Overview
NameCF417586
Unique NameCF417586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.289e-47
Identity = 80/177 (45.20%), Postives = 119/177 (67.23%), Query Frame = 3
Query:   33 YANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNI 563
            +A QLA  ++LPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  + ++Y+GF  +
Sbjct:    3 FAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGL 177          

HSP 2 Score: 46.9802 bits (110), Expect = 3.289e-47
Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPPHP 691
            GG  G TL  I +KYP I+ INFD PHVI+ AP +P
Sbjct:  184 GGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYP 219          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.099e-46
Identity = 79/189 (41.80%), Postives = 117/189 (61.90%), Query Frame = 3
Query:   18 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAK--LCASDIAAQLLTKNKD---APMMLDRILRLLASYSVVECSLDASGAR--RLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNI 563
            +++  YA QLA  ++LPM ++   ELG+ E+L K   G K  L   ++ A++     D   A  M+DR+LRLLASY VV C ++    R  R YS   V K+  PN+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G D +FN+ FN  M N++ ++   +L+ Y GF+ +
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGV 202          

HSP 2 Score: 54.6842 bits (130), Expect = 2.099e-46
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPPHP 691
            GG +G TL AIT+++P+I G+NFD PHVI  APP P
Sbjct:  209 GGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFP 244          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 7.891e-46
Identity = 88/186 (47.31%), Postives = 121/186 (65.05%), Query Frame = 3
Query:   18 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDK-VGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNI 563
            +++  +A QLA   +LPMA++   EL + EI+ K V P   +  ++IAAQL T N +AP+MLDR+LRLLASYSVV  +L    +    RLY L  V K+   N+DGV L P +    DKV L+ W  LKDAILEGGIPFN+A+G++ F+Y G D +FNK FN  M + +++ M  ILE Y GF+ +
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGL 204          

HSP 2 Score: 40.0466 bits (92), Expect = 7.891e-46
Identity = 18/33 (54.55%), Postives = 18/33 (54.55%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAP 682
            GG  G     I  KYP I  INFD PHVI  AP
Sbjct:  211 GGGTGAVASMIVAKYPSINAINFDLPHVIQDAP 243          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.453e-44
Identity = 80/188 (42.55%), Postives = 118/188 (62.77%), Query Frame = 3
Query:   12 ERDQSFA-YANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDAS--GARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIK 566
            ++D+  A  A  LA     PM +++ +EL I +I  K G G  +  S+IA+Q+  KN +AP++LDR+LRLLAS+SV+ C L     G++R+Y    +  Y   N     LGPL+ +  DKV ++SW  L D ILEGG+PF RAHG+  F+Y G D +FN  FN  M ++T LVM  +L++Y GF+++K
Sbjct:   16 DKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVK 203          

HSP 2 Score: 45.8246 bits (107), Expect = 1.453e-44
Identity = 18/36 (50.00%), Postives = 26/36 (72.22%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPPHP 691
            GG++G+ +  I  K+ +IKGIN+D PHVI  AP +P
Sbjct:  209 GGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYP 244          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.274e-44
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 3
Query:   18 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKV------GPGAKLCASDIAAQLLTK-NKDAPMMLDRILRLLASYSVVECSLDASGARRL---YSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFD 557
            +++  YA QLA  ++LPM ++   ELG+ E L         G  A L  +++A +L +K N  A  M+DR+LRLLASY+VV C ++     +L   Y+   V K+  PN+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G D +FN+ FN  M N++ ++   +L+ Y GFD
Sbjct:   14 EEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFD 203          

HSP 2 Score: 50.8322 bits (120), Expect = 9.274e-44
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPPHP 691
            GG +G T+ A+ +++P+I+GIN+D PHVI  APP P
Sbjct:  212 GGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFP 247          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.936e-41
Identity = 76/192 (39.58%), Postives = 117/192 (60.94%), Query Frame = 3
Query:    3 VDGERDQSFAYANQLAMGTM--LPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGG-IPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQ 569
            VD    +   Y + L +  +  LPMA++   EL +FEI+ + GP A+L  SDI A++ TKN  A + LDRILR+L + S++  S   SG  R+Y LN  S+  V ++D V + P++    DK  ++S+  +KD +LE G IPF+R HG+  F+YAG + + NK FN AM   +++    + + YKGFDN+K+
Sbjct:   29 VDMAAQEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSG--RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKE 218          

HSP 2 Score: 46.9802 bits (110), Expect = 6.936e-41
Identity = 19/36 (52.78%), Postives = 26/36 (72.22%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPPHP 691
            GG +G +L  I  K+P+I+GINF+ PHVI  AP +P
Sbjct:  223 GGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYP 258          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.942e-30
Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 3
Query:   18 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGP-GAKLCASDIAAQL--LTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIP-FNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKGFDNI 563
            D +   A  L    + P  +    +L +FEI+ K  P GA +  S+IA++L   T++ D P  LDR+LRLLASYSV+  +   ++  GA R+Y L+ V KY VP++    L      +     L+ W   K+A+++  I  F   HGV  +E+ G D K N+ FN +M +  +  M  +LE Y GF+ I
Sbjct:   22 DSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGI 210          

HSP 2 Score: 47.3654 bits (111), Expect = 1.942e-30
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVIDHAPP 685
            GG  G  L+ I +KYP IKGINFD P VI++APP
Sbjct:  217 GGGSGRNLELIISKYPLIKGINFDLPQVIENAPP 250          
BLAST of CF417586 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.607e-12
Identity = 42/182 (23.08%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   30 AYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNIL----ESYKGFDNI 563
            A+  ++  G    + ++   ELGI +I+D       +  +D+A++L   + +   +  RILR L    ++       G ++ Y+L  ++     N    ++ P+I  +  K F+  W  +KD + + G  F +A G+ ++EY    P  ++ FN  M   T L+ S+++    + ++G D++
Sbjct:   16 AHVWKIIYGFADSLVLRCAVELGIVDIIDN--NNQPMALADLASKLPVSDVNCDNLY-RILRYLVKMEILRVEKSDDGQKK-YALEPIATLLSRNAKRSMV-PMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSL 192          

HSP 2 Score: 33.4982 bits (75), Expect = 3.607e-12
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 2
Query:  584 GGSLGITLQAITTKYPYIKGINFDQPHVI 670
            GG  G T++AI+  +P+IK   FD PHVI
Sbjct:  196 GGGNGTTVKAISDAFPHIKCTLFDLPHVI 224          
The following BLAST results are available for this feature:
BLAST of CF417586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
OMT1_CHRAE3.289e-4745.20Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_MAIZE2.099e-4641.80Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
IEMT_CLABR7.891e-4647.31(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
IMT1_MESCR1.453e-4442.55Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ9.274e-4441.58Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA6.936e-4139.58(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.942e-3034.92Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA3.607e-1223.083'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-516 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417586 ID=CF417586; Name=CF417586; organism=Citrus sinensis; type=EST; length=694bp
TAGTTGATGGAGAAAGAGACCAAAGCTTTGCATATGCTAATCAATTGGCG
ATGGGTACAATGCTACCCATGGCCATTCAAACGGTGTATGAGCTAGGCAT
TTTCGAGATCCTAGACAAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCAG
ATATTGCAGCCCAATTGCTCACCAAGAACAAAGACGCACCCATGATGCTG
GATCGGATTCTCAGGCTTCTGGCTAGCTACAGCGTTGTTGAATGCTCACT
TGATGCTTCTGGTGCCCGGAGACTATATAGTTTGAATTCTGTCTCCAAAT
ACTATGTGCCTAACAAAGATGGCGTCTTACTAGGACCCCTAATACAAATA
GTTCAGGACAAGGTCTTTCTGAAGAGCTGGTCCCAACTCAAAGATGCTAT
TCTTGAAGGAGGAATTCCATTTAATCGAGCCCATGGAGTGCATGTATTTG
AGTACGCAGGATTGGACCCTAAGTTCAATAAACATTTTAACACAGCAATG
TATAACTATACCTCTCTGGTTATGAGCAACATTCTTGAATCTTACAAGGG
TTTCGACAACATCAAGCAACTGGTCGNATGNTTGGTGGTAGTCTCGGCAT
TACTCTTCAAGCCATCACTACCAAGTACCCCTATATTAAGGGCATCAATT
TCGACCAGCCTCATGTTATTGACCATGCCCCACCACATCCACGT
back to top