CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 1
Query:    1 GKVYKGILP----------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            GKVY+G +            G +VA+KR    S+QG  E+ +E+ FL  L HRNLV L+GYC E+ E +LVYEFM  G
Sbjct:   98 GKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKG 175          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG+L +GT +AVKR  + S QGE EF  E+  +++L H NLV L+G+  +  E++LVYEF+SN
Sbjct:  351 GEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSN 417          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK +L DG  VAVKRA   ++     + F +E++ L ++ H N+V+L+GYC E GE++LVYE+M +G
Sbjct:  531 GFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHG 600          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            GKVYKG+LPD T VAVKR  +  S  G+  F  E++ +S   HRNL+ L+G+C  + E++LVY FM N
Sbjct:  302 GKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQN 369          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   31 GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G V+AVKR      QG +E+LTEI +L +L H NLV L+GYC E+ +++LVYEFM  G
Sbjct:   93 GLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKG 150          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   31 GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G V+AVKR  +   QG +E+L EI +L +L H NLV L+GYC EE  ++LVYEFM+ G
Sbjct:  100 GIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRG 157          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG L +GT VAVKR    S QGE EF  E+  +++L HRNLV L+G+  +  E++LV+EF+ N
Sbjct:  358 GEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPN 424          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1
Query:    1 GKVYKGILPDGT----------VVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G V+KG L + T          V+AVK+  +   QG +E+LTEI +L +L H NLV L+GYC E+  ++LVYEFM  G
Sbjct:   79 GCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKG 156          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.508e-11
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG L DG  VAVK    GS QG+ +F+ EI  +S + HRNLV L G C E   ++LVYE++ NG
Sbjct:  705 GPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNG 772          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.508e-11
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG+L DG++VAVKR++       +EF+ EI  LS+++HRN+V L+G C E    +LVYE++ NG
Sbjct:  441 GTVYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNG 508          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
CX32_ARATH8.843e-1246.15Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK18_ARATH8.843e-1250.75Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
ACCR2_ARATH8.843e-1245.71Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5129_ARATH1.155e-1150.00Probable LRR receptor-like serine/threonine-protei... [more]
Y3545_ARATH1.155e-1153.45Probable receptor-like protein kinase At3g55450 OS... [more]
NAK_ARATH1.155e-1153.45Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK30_ARATH1.155e-1150.75Putative cysteine-rich receptor-like protein kinas... [more]
BIK1_ARATH1.155e-1144.87Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5614_ARATH1.508e-1151.47Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH1.508e-1148.53Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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