CF417593

Overview
NameCF417593
Unique NameCF417593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            GKVY G++ +G  VAVK   E S QG KEF  E+  L R+HH NL SLVGYC+E    +L+YE+M+N
Sbjct:  586 GKVYHGVI-NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMAN 651          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+VYKG L  G  VA+KR  +GS QG +EF  E+  +++L HRNL  L+GYC +  E++LVYEF+ N
Sbjct:  359 GEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPN 425          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKGILPD ++VA+K+A+ G     ++F+ E+  LS+++HRN+V L+G C E    +LVYEF++NG
Sbjct:  421 GTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNG 488          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY G + +   VAVK     S QG KEF  E++ L R+HH+NLV LVGYCDE     L+YE+M+NG
Sbjct:  604 GMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANG 671          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK  LPDGT VA+KR    + Q ++EF  E++ LSR  H NLV L+GYC+ + +++L+Y +M NG
Sbjct:  755 GLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNG 822          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYK  LP    VAVK+  E   QG +EF+ E++ L ++ H NLVSL+GYC    E++LVYE+M NG
Sbjct:  929 GTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNG 996          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.590e-13
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G+V+KG+L DG+ +AVKR  + S QG +EF  E   +++L HRNLV ++G+C E  E++LVYEF+ N
Sbjct:  333 GEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPN 399          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.689e-13
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VYKG LP+GTVVAVKR ++    GE +F TE++ +    HRNL+ L G+C    E+MLVY +M NG
Sbjct:  312 GMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNG 379          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.689e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 204
            G VY+G L DG  VA+KR +  +      + E  F +EI FLSRLHH++LV LVGYC+E  E++LVY++M NG
Sbjct:  508 GVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNG 580          
BLAST of CF417593 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 GKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 201
            G VYKG L +GT VAVKR  + S QG +EF  E   +++L HRNLV L+G+C E  EQ+L+YEF+ N
Sbjct:  362 GAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHN 428          
The following BLAST results are available for this feature:
BLAST of CF417593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
SIRK_ARATH2.749e-1353.73Senescence-induced receptor-like serine/threonine-... [more]
CRK25_ARATH2.749e-1350.75Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
WAK1_ARATH3.590e-1348.53Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
RLK6_ARATH3.590e-1351.47Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PSKR1_DAUCA3.590e-1348.53Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
EXS_ARATH3.590e-1350.00Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK33_ARATH3.590e-1349.25Putative cysteine-rich receptor-like protein kinas... [more]
Y5457_ARATH4.689e-1351.47Probable LRR receptor-like serine/threonine-protei... [more]
ACCR3_ARATH4.689e-1350.68Putative serine/threonine-protein kinase-like prot... [more]
CRK11_ARATH6.124e-1353.73Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-523 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417593 ID=CF417593; Name=CF417593; organism=Citrus sinensis; type=EST; length=205bp
GGAAAGGTTTATAAAGGCATTCTTCCTGATGGCACGGTTGTTGCTGTGAA
GCGTGCCCAAGAGGGATCTTTGCAGGGAGAGAAGGAGTTCTTAACAGAAA
TACAATTTTTGTCAAGATTACATCATCGGAACCTTGTATCTTTGGTTGGA
TACTGTGATGAAGAAGGGGAACAGATGTTGGTGTATGAGTTTATGTCAAA
TGGGC
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