CF417612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 19 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 P + Y K E L Y++ GI+ RI R N YGP GR + F +A + + G QTRSF ++ + V+G++RL + + PVNIG+ +M E+AE V ++ I + P+ R R D + KE LGW P ++L++GL Sbjct: 167 PAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGL 329
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.613e-13 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 34 SCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV-NIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 S Y KR E + YH +GI++ R F YG D F L G+ + V G R F Y+SD+VDG++R ++ + + N+GN ++ E +++ +N + + K + D + D+SK+++LLG++PKV + +GL Sbjct: 155 SLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPD--MAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGL 309
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 56/188 (29.79%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 13 VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME---GENTGP-VNIGNP-GEFTMLELAE---------TVKELINPEIEIKMVENTP------DDPRQRKPDISKAKELLGWEPKVKLRD 495 V PI R Y K++ + +++ Y ++G++ + R FN GPR++ I R ++ I + G P+ + + G Q R F +SD ++ L R++E G G +NIGNP E ++ ELAE +++ P + VE++ D RKP I AK L WEPKV++ + Sbjct: 453 VGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEE 640
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 40 YDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEGENTGPVNIGNPGEFTMLELAETVKELI--NPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 Y K AE L+ Y R +G+ + R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +GE N+G E ++++A + +L +PE I+ VEN P + ++ D K K+ LGW+ + DGL Sbjct: 161 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKK-LGWQERTNWEDGL 314
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 51/168 (30.36%), Postives = 76/168 (45.24%), Query Frame = 1 Query: 4 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV-NIGNPGEFTMLELAETVKELIN-PEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 W +P+ S Y K ++ L YH+ HG+ + + R N YGPR + +++ F+ + L G + V G R + +VSD GL + G V +IG E T LEL E + E P I V + R+ D SK LG+ P+V DG+ Sbjct: 140 WAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGI 305
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP3 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12 Identity = 55/188 (29.26%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 13 VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME---GENTGP-VNIGNP-GEFTMLELAE---------TVKELINPEIEIKMVENTP------DDPRQRKPDISKAKELLGWEPKVKLRD 495 V PI R Y K++ + +++ Y ++ ++ + R FN GPR++ I R ++ I + G P+ + + G Q R F +SD ++ L R++E G G +NIGNP E ++ ELAE +++ P + VE++ D RKP I AK L WEPKV++ + Sbjct: 453 VGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEE 640
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 40 YDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEGENTGPVNIGNPGEFTMLELAETVKEL--INPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 Y K AE L+ Y R +G+ + R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +GE NIG E ++++A + +L I+P+ I+ VEN P + ++ D K K+ LGW + +GL Sbjct: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK-LGWCERTNWEEGL 312
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 40 YDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL-IRLMEGENTGPVNIGNPGEFTMLELAETVKELIN--PEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 Y K AE L+ Y R +G+ + R N YGP N +++ FI A+RG+ L + G+ RS+ Y D+ + + L +GE NIG E + ++A+ + +L N PE IK V+N P + ++ D K K+ LGW + +GL Sbjct: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP--NQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKK-LGWSERTTWEEGL 312
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: FCL1_ORYSJ (Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 82 YHRQHGIQIRIARIFNTYGPRMNI--DDGRVVSNFI-----AQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEG-ENTGPVNIGNPGEFTMLELAETVKELINPEIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGL 501 Y QHG A N YGP+ N ++ V+ I A+A + V G+ R F +V D+ D +I LM+ VN+G+ E T+ ELAE VKE++ + ++ + PD ++ D SK +E +GW+PKV L++GL Sbjct: 166 YRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGL 312
BLAST of CF417612 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.189e-12 Identity = 48/174 (27.59%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 19 PIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGPV-NIGNPGEFTMLELAETVKELINP----------EIEIKMVENTPDDPRQRKPDISKAKELLGWEPKVKLRDGLPL 507 P S Y K ++ L+ +H +G+ + N YGP + +++ IA+AL GEPL V G Q R + +VSD + + ++ G N+G E +E+ + + L++ E +I V + P R+ D SK K+ LGWEP G+ L Sbjct: 151 PYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAL 322 The following BLAST results are available for this feature:
BLAST of CF417612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417612 ID=CF417612; Name=CF417612; organism=Citrus sinensis; type=EST; length=654bpback to top |