CF417624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_GUITH (50S ribosomal protein L31, chloroplastic OS=Guillardia theta GN=rpl31 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 9.398e-14 Identity = 31/65 (47.69%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 323 K+++HP++Y +AKVYC+G+L+MT G T+ E VD+WSGNH FY G + + + +VE+F +K+G Sbjct: 3 KQNLHPKWYAEAKVYCDGQLIMTIGSTKSELNVDIWSGNHPFYTGSQKMLDTEG-RVERFMRKYG 66
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_CYACA (50S ribosomal protein L31, chloroplastic OS=Cyanidium caldarium GN=rpl31 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIME 344 KK+IHPQ+YE+AK YCNGE+V G T+ E D+WSGNH FY+G + V + +++KF +K+ SE E Sbjct: 3 KKNIHPQWYEEAKFYCNGEIVKIIGSTRMEINADIWSGNHPFYIGTQKIVDTEG-RIDKFIRKYNLNSENSE 73
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RL31_PROM1 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain NATL1A) GN=rpmE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 320 K DIHP +Y +AKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+ Sbjct: 3 KSDIHPTWYPEAKVICNGEVVMTTGATQPEIQVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKY 65
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RL31_CYAP7 (50S ribosomal protein L31 OS=Cyanothece sp. (strain PCC 7424) GN=rpmE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 323 K DIHP +Y +AKV CNGE+VMT G TQ E V+VWSGNH FY G + + + +V++F +K+G Sbjct: 3 KADIHPTWYPEAKVICNGEVVMTVGSTQPEIHVEVWSGNHPFYTGTQKMIDTEG-RVDRFLRKYG 66
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RL31_SYNY3 (50S ribosomal protein L31 OS=Synechocystis sp. (strain PCC 6803) GN=rpmE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 323 K DIHP +Y DAKV CNGE++MT G T+ E V++WSGNH FY G + + + +V++F +K+G Sbjct: 3 KADIHPTWYPDAKVTCNGEVIMTVGSTKPEINVEIWSGNHPFYTGTQKIIDTEG-RVDRFMRKYG 66
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_PORPU (50S ribosomal protein L31, chloroplastic OS=Porphyra purpurea GN=rpl31 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13 Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 320 K DIHP +Y DAKVYC+G+L+MT G T+ E VD+WSGNH F+ G + + + +VE+F +K+ Sbjct: 3 KVDIHPIWYPDAKVYCDGQLIMTIGSTKPELHVDIWSGNHPFFTGSQRIIDTEG-RVERFMRKY 65
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_PORYE (50S ribosomal protein L31, chloroplastic OS=Porphyra yezoensis GN=rpl31 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12 Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 320 K +IHP +Y +AKVYC+G+L+MT G T+ E VD+WSGNH F+ G + + + +VE+F +K+ Sbjct: 3 KDNIHPNWYPEAKVYCDGQLIMTIGSTKPELHVDIWSGNHPFFTGSQRIIDTEG-RVERFMRKY 65
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_GRATL (50S ribosomal protein L31, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl31 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 320 +K IHP+++ D KVYC+G+ VMT G TQ E VD+WSGNH F+ G + + + +VEKF +K+ Sbjct: 3 QKSIHPKWFNDTKVYCDGKHVMTVGSTQAELHVDIWSGNHPFFTGSQRIIDTEG-RVEKFMRKY 65
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_EMIHU (50S ribosomal protein L31, chloroplastic OS=Emiliania huxleyi GN=rpl31 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12 Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 129 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDAD-QVEKFRQKFG 323 K IHP +Y +AKVYC+G+LVM G T+ VD+WSGNH FY G S ++D + +VE+F +K+G Sbjct: 3 KSAIHPDWYPNAKVYCDGQLVMKVGATKPTLNVDIWSGNHPFYTG--SQTIIDTEGRVERFMRKYG 66
BLAST of CF417624 vs. ExPASy Swiss-Prot
Match: RK31_PALPL (50S ribosomal protein L31, chloroplastic OS=Palmaria palmata GN=rpl31 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.948e-12 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 135 DIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 320 DIHP++Y D+KVYC+G+ +MT G T+ E VD+WSGNH F+ G + + + +VE+F +K+ Sbjct: 5 DIHPEWYNDSKVYCDGKHIMTIGSTKPELHVDIWSGNHPFFTGSQRIIDTEG-RVERFMRKY 65 The following BLAST results are available for this feature:
BLAST of CF417624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417624 ID=CF417624; Name=CF417624; organism=Citrus sinensis; type=EST; length=514bpback to top |