CF417629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KKCC2_MOUSE (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Mus musculus GN=Camkk2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 6 SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN----LPRELTEPAQAIYYRKENPTFSLQSVEEITKIV 380 +R+ + GK DVW+ GVTLY + G PF D+ S+I + + PD I++D ++L++R+ NP RI + EIK HPW ++ LP E E + +E S++ + + ++ Sbjct: 362 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSE-DENCTLVEVTEEEVENSVKHIPSLATVI 485
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KKCC2_HUMAN (Calcium/calmodulin-dependent protein kinase kinase 2 OS=Homo sapiens GN=CAMKK2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 3 Query: 6 SRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN----LPRELTEPAQAIYYRKENPTFSLQSVEEITKIV 380 +R+ + GK DVW+ GVTLY + G PF D+ S+I + + PD I++D ++L++R+ NP RI + EIK HPW ++ LP E E + +E S++ + + ++ Sbjct: 362 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSE-DENCTLVEVTEEEVENSVKHIPSLATVI 485
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KC2D2_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 2 chain OS=Danio rerio GN=camk2d2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R++ GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NPS+RIT E HPW Sbjct: 186 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAPKHPW 270
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: IPL1_CANGA (Spindle assembly checkpoint kinase OS=Candida glabrata GN=IPL1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLP 287 ++ REYD ++ DVW+ GV Y ++VG PFE+ ++ RI+ P+ IS+D ++L+S++ V + ++R+++ +K+HPW LKN P Sbjct: 269 ITPREYDEQV-DVWALGVLAYELVVGVPPFEENSKELTYK----RILKCDLNFPE--SISKDAKDLISKLLVTDTTQRLSLTGVKTHPWILKNKP 356
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPK4_ARATH (CBL-interacting serine/threonine-protein kinase 4 OS=Arabidopsis thaliana GN=CIPK4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 36/106 (33.96%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIY 320 +++R YDG AD WSCGV L+V+L G PF+D +RK R Y+ P + IS+ R+++ ++ NP R++I+ + WF K+L E++E +++ Sbjct: 194 IAQRGYDGAKADAWSCGVFLFVLLAGYVPFDDANIVAMYRKIHKR----DYRFPSW--ISKPARSIIYKLLDPNPETRMSIEAVMGTVWFQKSL--EISEFQSSVF 291
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2A_RAT (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus GN=Camk2a PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R++ GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NPS+RIT E HPW Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2A_PONAB (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Pongo abelii GN=CAMK2A PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R++ GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NPS+RIT E HPW Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2A_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus GN=Camk2a PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R++ GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NPS+RIT E HPW Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2A_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Homo sapiens GN=CAMK2A PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R++ GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NPS+RIT E HPW Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KC2D1_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 1 chain OS=Danio rerio GN=camk2d1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 29/87 (33.33%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R+E GK D+W+CGV LY++LVG PF D++ + +++ + A + P++ ++ + ++L++++ NP++RIT E HPW Sbjct: 186 RKEPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAAEALKHPW 270 The following BLAST results are available for this feature:
BLAST of CF417629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417629 ID=CF417629; Name=CF417629; organism=Citrus sinensis; type=EST; length=668bpback to top |