CF417629

Overview
NameCF417629
Unique NameCF417629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11860 contig Csv1_Contig11860:96..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPK7_ORYSJ (CBL-interacting protein kinase 7 OS=Oryza sativa subsp. japonica GN=CIPK7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.494e-14
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNL 284
            L R+ YDG  AD WSCGV L+V+L G  PF+D       RK   R    +Y +P +V  SQ  R L+SR+   NP+ R+ + E+ +HPWF ++L
Sbjct:  196 LRRKAYDGAKADAWSCGVILFVLLAGHLPFDDSNIADMCRKAHRR----EYALPRWV--SQPARRLVSRLLDPNPATRLAVAELATHPWFKRSL 283          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 281
            L  + YDG L+D+WSCGV LYVML+G  PF+D    +N      +I     +IP +  +S   +NLL RI   NP +RI +  IKSH WF K+
Sbjct:  185 LQNKGYDGSLSDIWSCGVILYVMLIGYLPFDD----RNIVVLYQKIFKGDTQIPKW--LSHSAQNLLRRILEPNPMKRIDMAGIKSHEWFQKD 271          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269
            R+EY+G   DVWS GV L+V++ G  PF    D  N+ +   +I+A  Y IP Y  ++ +C++L+SR+ V +P +R T++EI +HPW
Sbjct:  280 RKEYNGPSVDVWSMGVVLFVLVTGYLPF----DGDNYVELFQKILAGNYTIPSY--LTHECKSLISRMLVVDPDKRATMEEIINHPW 360          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: PPK9_SCHPO (Protein kinase domain-containing protein ppk9 OS=Schizosaccharomyces pombe GN=ppk9 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.346e-14
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 3
Query:   12 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYY--RKENPTFS 347
            R YDG   DVW CG+ LY+MLVG +PFED          +SR+    Y IP +V  S    +L+ ++ +  P+ RI + EI  HPWF+ +LP     P++   +  +  + TFS
Sbjct:  194 RYYDGCDVDVWGCGILLYLMLVGEFPFED----VTISNVLSRVCKGIYTIPSFV--SSSASDLIRQMLMVLPTSRIKVAEIMQHPWFIADLPTHSRLPSRTSSFSSKHRSVTFS 301          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 272
            L ++ YDG  AD+WSCGV L+++  G  PF D      +RK    I   QYK+PD+   S D R LL R+   NP  RIT++EI   PWF
Sbjct:  199 LLKKGYDGSKADIWSCGVVLFLLNAGYLPFRDPNIMGLYRK----IHKAQYKLPDWT--SSDLRKLLRRLLEPNPELRITVEEILKDPWF 282          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKEN 335
            LS + Y+G +AD+WSCGV LYV++ G  PF++ + P  +    S+I   ++  P Y  +    ++L++RI   NP  RITI EI+   WFLK+       P Q I Y   N
Sbjct:  179 LSHKGYNGAVADIWSCGVILYVLMAGYLPFDEMDLPTLY----SKIDKAEFSCPSYFALG--AKSLINRILDPNPETRITIAEIRKDEWFLKDY-----TPVQLIDYEHVN 278          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 281
            L ++ YDG  AD+WSCGV LYV+L G  PF+D+     +RK    I    ++ P +   S + R L+S++ V +P RRI+I  I   PW  KN
Sbjct:  184 LKKKGYDGAKADIWSCGVVLYVLLAGCLPFQDENLMNMYRK----IFRADFEFPPW--FSPEARRLISKLLVVDPDRRISIPAIMRTPWLRKN 270          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEP 305
            +S + Y G   DVWS GV LYVML G  PF+D+  P  F+K  + +    Y +P+Y  +S   ++LL+R+ V NP  RITI EI    WF +++P  L  P
Sbjct:  222 ISGKLYAGPEVDVWSAGVILYVMLCGRLPFDDEFIPALFKKISNGV----YTLPNY--LSAGAKHLLTRMLVVNPLNRITIHEIMEDDWFKQDMPDYLLPP 316          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SNRK_HUMAN (SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 38/123 (30.89%), Postives = 71/123 (57.72%), Query Frame = 3
Query:   15 EYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKENPTFSLQSVEEITKIVE 383
            EYD    D+WS GV L++++ G  PF++  D +    T++ IM  +Y +P   H+S++C++L++R+   +P RR +++EI++HPW       +  +P+ A  Y     ++   S EE   I++
Sbjct:  190 EYDAPAVDIWSLGVILFMLVCGQPPFQEANDSE----TLTMIMDCKYTVPS--HVSKECKDLITRMLQRDPKRRASLEEIENHPWL------QGVDPSPATKYNIPLVSYKNLSEEEHNSIIQ 300          
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 3
Query:    3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEP 305
            +S + Y G   DVWS GV LYVML G  PF+D+  P  F+K  + +    Y +P+Y  +S   ++LL+R+ V NP  RITI EI    WF +++P  L  P
Sbjct:  220 ISGKLYAGPEVDVWSSGVILYVMLCGRLPFDDEFIPALFKKISNGV----YTLPNY--LSPGAKHLLTRMLVVNPLNRITIHEIMEDEWFKQDMPDYLLPP 314          
The following BLAST results are available for this feature:
BLAST of CF417629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
CIPK7_ORYSJ1.494e-1442.55CBL-interacting protein kinase 7 OS=Oryza sativa s... [more]
CIPKH_ORYSJ1.951e-1444.09CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
MRKA_DICDI3.328e-1441.38Probable serine/threonine-protein kinase MARK-A OS... [more]
PPK9_SCHPO4.346e-1436.84Protein kinase domain-containing protein ppk9 OS=S... [more]
CIPKM_ARATH5.677e-1444.44CBL-interacting serine/threonine-protein kinase 22... [more]
CIPK8_ARATH5.677e-1437.84CBL-interacting serine/threonine-protein kinase 8 ... [more]
CIPK5_ARATH5.677e-1440.86CBL-interacting serine/threonine-protein kinase 5 ... [more]
SNF1_CANAL7.414e-1441.58Carbon catabolite-derepressing protein kinase OS=C... [more]
SNRK_HUMAN9.683e-1430.89SNF-related serine/threonine-protein kinase OS=Hom... [more]
SNF1_CANTR9.683e-1441.58Carbon catabolite-derepressing protein kinase OS=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-559 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417629 ID=CF417629; Name=CF417629; organism=Citrus sinensis; type=EST; length=668bp
TTCTTTCTCGGAGAGAATATGATGGCAAGTTGGCGGATGTATGGTCTTGT
GGAGTTACTCTTTATGTTATGCTAGTGGGAGCTTACCCGTTTGAAGACCA
GGAGGACCCGAAGAATTTCAGGAAGACCATTAGTAGAATTATGGCTGTTC
AATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTAGAAATCTT
CTTTCTCGCATTTTTGTTGCCAATCCGTCAAGGAGAATCACCATTAAAGA
AATCAAGAGCCATCCATGGTTTCTAAAGAACTTGCCCAGGGAACTCACAG
AGCCAGCTCAAGCCATCTACTATAGGAAAGAAAACCCAACCTTTTCCCTC
CAAAGTGTTGAAGAGATCACAAAAATTGTGGAAGAGGCCAAAGTTCCTCC
TCCTGTGTCTCGATCAATCGGAGGCTTTGGCTGGGGAGGAGAAGAAGATG
GTGACGAGAAGGAAGAGGAAACTGATGCAGACGAAGAAGACGAGTATGAG
AAGACGGTCAAGGAGGCTCAGCAAAGTGGAGAAGTTAGCGTCAGTTAAGA
ATTAATTTATCCCTCTTCCAAATATTTGAGTCAAGGATTTTGCCCCTGGG
ATTACCTGTACTTAAGCATGCTTTCTAGTTTCATGTTTGTATAGAGTCAG
TTTTCGATTTAGGACCTG
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