CF417629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12 Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKN 281 LS + YDG AD+WSCGV L+V+L G PF + + P +RK I A ++ P + S + + L+ RI NP RI I+ IK PWF N Sbjct: 181 LSGQGYDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRK----INAAEFSCPPW--FSAEVKFLIHRILDPNPKTRIQIQGIKKDPWFRLN 267
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 12 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 ++YDG DVWS GV LY ++ G+ PF+ Q N ++ R++ +Y+IP Y +S DC NLL + + NPS+R T+++I W Sbjct: 224 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLKKFLILNPSKRGTLEQIMKDRW 303
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 12 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 ++YDG DVWS GV LY ++ G+ PF+ Q N ++ R++ +Y+IP Y +S DC NLL + + NPS+R T+++I W Sbjct: 224 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLKKFLILNPSKRGTLEQIMKDRW 303
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2B_RAT (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus GN=Camk2b PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 31/87 (35.63%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R+E GK D+W+CGV LY++LVG PF D++ K +++ + A + P++ ++ + +NL++++ NP++RIT E HPW Sbjct: 187 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 271
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2B_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Mus musculus GN=Camk2b PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 31/87 (35.63%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R+E GK D+W+CGV LY++LVG PF D++ K +++ + A + P++ ++ + +NL++++ NP++RIT E HPW Sbjct: 187 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 271
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: KCC2B_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Homo sapiens GN=CAMK2B PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 31/87 (35.63%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 9 RREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPW 269 R+E GK D+W+CGV LY++LVG PF D++ K +++ + A + P++ ++ + +NL++++ NP++RIT E HPW Sbjct: 187 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 271
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLK 278 LS++ Y+G DVWSCG+ L+V++ G PF D N +I +Y+ P + +S D + +SR+ NP RITI EI PWF++ Sbjct: 194 LSKKGYEGAKVDVWSCGIVLFVLVAGYLPFND----PNVMNMYKKIYKGEYRFPRW--MSPDLKRFVSRLLDINPETRITIDEILKDPWFVR 279
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYRKEN 335 +S + Y G DVWSCGV LYVML PF+D+ P F+ + + Y +P + +S L+ R+ + NP RI+I EI WF +LP L P + +EN Sbjct: 223 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV----YTLPKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDLKPHPEEEN 327
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 12 REYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWFLKNLPRELTEP 305 ++YDG DVWS GV LY ++ G+ PF+ Q N ++ R++ +Y+IP Y +S DC NLL R V NP +R T+++I W E +P Sbjct: 227 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGKYRIPFY--MSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEEELKP 318
BLAST of CF417629 vs. ExPASy Swiss-Prot
Match: CIPKE_ARATH (CBL-interacting serine/threonine-protein kinase 14 OS=Arabidopsis thaliana GN=CIPK14 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 3 LSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTISRIMAVQYKIPDYVHISQDCRNLLSRIFVANPSRRITIKEIKSHPWF 272 L+++ YDG D+WSCG+ L+V+ G PF D +RK I +++IP + S D R LL+R+ NP RITI+EI PWF Sbjct: 193 LAKKGYDGAKIDIWSCGIILFVLNAGYLPFNDHNLMVMYRK----IYKGEFRIPKWT--SPDLRRLLTRLLDTNPQTRITIEEIIHDPWF 276 The following BLAST results are available for this feature:
BLAST of CF417629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417629 ID=CF417629; Name=CF417629; organism=Citrus sinensis; type=EST; length=668bpback to top |