CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.765e-35
Identity = 92/264 (34.85%), Postives = 141/264 (53.41%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--------------------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGED-DVFHSFNRVFVVGGP------------KKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEE-ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            MG DYY ILG+++ AS +D+KKAY K A +++PDK  +   +AE +   V EAYEVLSDP+KR ++D +G                       G P +    F+ +F  + P              ++    D D F +F   F + G             K+ PP+ + L  +LEE+Y G TK++KI RK ++ +G + + E+ ILTI +K GWK+GT+ITF  +G+      PAD+VF++ +K H  F RDG+++I T  I+
Sbjct:    1 MGKDYYCILGIEKGASDEDIKKAYRKQALRFHPDK--NKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHAT---FAAFFGGSNPFEIFFGRRMGGGRDSDEMEVDGDPFGAFG--FSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKIS 257          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33
Identity = 89/240 (37.08%), Postives = 136/240 (56.67%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFT---IPHXXXXXXXXXXXXXNEAFGE------DDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDING--NTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTI 698
            MG DYY +LG+ RN+    +K+AY ++A K +P K   N+  +     ++ EAY+VLSDP KR ++D +G  +G        F     +T   + H             N  F E       +V  +F  +   G  K+ P +E  L  +LE+L+ G TKKIKI R++++ +G  +TIK ++ILTI+VKPGW++GTRITFE++G+   N+ PAD++FIV EK H  F R+ ++L     I
Sbjct:    1 MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLK--SNEPSSAEIFRQIAEAYDVLSDPMKRGIYDKFG-EEGLKGGIPLEFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSEFFDAEGSEVDLNFGGLQGRGVKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIK-DKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPI 236          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.851e-33
Identity = 93/244 (38.11%), Postives = 139/244 (56.97%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPR----------------SADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV--DINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDL 680
            MG DYY +L V RN+    +KKAY K+A K +P K   ++  A     ++ EAY+VLSDP KR ++D +G   +  G P                 + D +F E+F    P               +A G +D+  +F  ++  G  K+ PPIE  L  +LE+L+ G TKKIKI R+++  D   +TIK ++ILTI+V+PGW++GTRITFE++G+   N+ PAD++FIV EK H  F R+ ++L
Sbjct:    1 MGLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLK--SSEPGAPEIFKQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFF----------DAEG-NDIDLNFGGLWGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDRYSSTIK-DKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNL 230          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAC (Chaperone protein dnaJ OS=Thermoplasma acidophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24
Identity = 72/185 (38.92%), Postives = 96/185 (51.89%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFD---TYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFG---EDDVFHSFNRVFVVGGPKKAP---PIENRLPCTLEELYKGTTKKIKIYRKIV--DINGNTIKVEEILT 533
            M  DYYKILGVDRNA+ +++KKA+ ++A KW+PD +P+NK+EAE K   + EAYEVLSDPQKR M+D   T     G      D F+ Y D                  N+ FG     D F  F R     G ++      +   L  TLE+ Y GT K+IK  R  +  D NG   K  +++T
Sbjct:    1 MAKDYYKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQEAEEKFKEISEAYEVLSDPQKRRMYDQTGTVDFGAGGQNFNWDNFTHYSDLN-------------DIFNDIFGGNFASDFFSGFGR-----GQREEQYDLDLYTNLDITLEDAYYGTEKRIKYRRNAMCPDCNGTGAKNGKLIT 167          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ---GSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGED---DVFHSFNRVFVVGGPKKAPPIE----NRLPCTLEELYKGTTKKIKIYRKIV--DINGNTIKVEEILT 533
            M  DYYKILGVDRNAS +D+KKA+ ++A KW+PD +PDNK EAE K   + EAYEVLSDP+KR ++D  G      G      D F+ + D                  NE FG +   D F  F      G  +    I+      L  +LEE Y GT K+IK  R  +  D  G   K  +++T
Sbjct:    1 MAKDYYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYDQTGSVDFGGGGSNFNWDNFTHFSDIN-------------DIFNEIFGGNFGSDFFSGF------GNRQSTRNIDLDMYTNLDISLEEAYYGTEKRIKFRRNAICPDCKGTGAKNGKLIT 167          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 75/233 (32.19%), Postives = 112/233 (48.07%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM--------PQGSPRSADDI--FSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVT 689
            DYY ILGV RNA+ +++K+AY+++A +++PD   +   EAE K   + EAY VLSDP+KR ++DTYG         P G   S  D+  FSE+F                    E FG   +F  F R       +K   +   LP TLEE + G         ++V++ G  +      ++ + PG ++G+ I     G   Q   P D++ +V   PH VF  +G DL  T
Sbjct:    6 DYYAILGVPRNATQEEIKRAYKRLARQYHPDV--NKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFSEFF-------------------QELFG-PGLFGGFGR-----RSRKGRDLRAELPLTLEEAFHGG-------ERVVEVAGRRV------SVRIPPGVREGSVIRVPGMGG--QGNPPGDLLLVVRLLPHPVFRLEGQDLYAT 196          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 74/244 (30.33%), Postives = 112/244 (45.90%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY---GMPQGSPRSADDIFSEYF-DFTIPHXXXXXXXXXXXXXNEAFGED-----DVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI------NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            G D+YKILGV R+AS  D+KKAY K+A + +PD+ PD+ + A+ K   +  AYEVLSD +KR  +DTY   G+  G   S  DIFS +F DF                       D     +  ++ N V VV     A     +  C   +  + T      ++   ++      N   +  E  L + ++PG + G    F  +G    + +P D+ F +    HS+F R G+DL    TI+
Sbjct:   23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPR-AQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTIS 265          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.536e-20
Identity = 79/285 (27.72%), Postives = 121/285 (42.46%), Query Frame = 3
Query:   27 YKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--QG----SPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV--------------------------------------------DIN--GNTIKVEE---------------ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDL 680
            Y++L VD  AS  +LKKAY K+A K++PDK P+    A  K   +  AYE+L+D +KRA +D +G    QG       SADD+F+ +F                      FG            +  GP+K   + + +  TLE+LY+G T K+ + +K++                                            D N  G TI+ E+               ILT++V+ G   G +I F+E+G     + P DV+F++D+K H  F R G+ L
Sbjct:    8 YEVLNVDVTASQAELKKAYRKLALKYHPDKNPN----AGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMSADDLFASFF------------------GGGMFGGG----------MPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGPMIQRMQMTCPDCNGAGETIRDEDRCKECDGAKVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHL 260          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 73/244 (29.92%), Postives = 111/244 (45.49%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY---GMPQGSPRSADDIFSEYF-DFTIPHXXXXXXXXXXXXXNEAFGED-----DVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI------NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            G D+YKILGV R+AS  D+KKAY K+A + +PD+ PD+  +A+ K   +  AYEVLSD +KR  +DTY   G+  G   S  DIFS +F DF                       D     +  ++ N V VV     A     +  C   +  + T      ++   ++      N   +  E  L + ++PG + G    F  +G    + +P D+ F +    H +F R G+DL    TI+
Sbjct:   23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD-PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTIS 265          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 73/244 (29.92%), Postives = 111/244 (45.49%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY---GMPQGSPRSADDIFSEYF-DFTIPHXXXXXXXXXXXXXNEAFGED-----DVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI------NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            G D+YKILGV R+AS  D+KKAY K+A + +PD+ PD+  +A+ K   +  AYEVLSD +KR  +DTY   G+  G   S  DIFS +F DF                       D     +  ++ N V VV     A     +  C   +  + T      ++   ++      N   +  E  L + ++PG + G    F  +G    + +P D+ F +    H +F R G+DL    TI+
Sbjct:   23 GRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD-PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTIS 265          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB4_BOVIN3.765e-3534.85DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DJB13_HUMAN1.211e-3337.08DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DJB13_MOUSE7.851e-3338.11DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DNAJ_THEAC3.905e-2438.92Chaperone protein dnaJ OS=Thermoplasma acidophilum... [more]
DNAJ_THEVO4.318e-2338.71Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ2_THET85.278e-2132.19Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DJB11_BOVIN6.894e-2130.33DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
MAS5_SCHPO1.536e-2027.72Mitochondrial protein import protein mas5 OS=Schiz... [more]
DJB11_PONAB2.620e-2029.92DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN2.620e-2029.92DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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