CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ------------GSP-------RSADDIFSEYF 272
            DYY++LGV R+AS +D+KKAY K A KW+PDK P+NK+EAE K  +V EAYEVLSD +KR ++D YG                SP       R+ DD+F E+F
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGGSHFDSPFEFGFTFRNPDDVFREFF 105          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB6_MOUSE (DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY------------GMPQGSP-------RSADDIFSEYF 272
            DYY++LGV R+AS +D+KKAY K A KW+PDK P+NK+EAE K  +V EAYEVLSD +KR ++D Y            G+   SP       R+ DD+F E+F
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGGIHFDSPFEFGFTFRNPDDVFREFF 105          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--------QGSP-----------RSADDIFSEYF 272
            +YY +LGV RN+S DD+KKAY ++A KW+PDK PDNK+EAE +   V EAYEVLSD +KR ++D YG           GS            RS DD+F E+F
Sbjct:    3 EYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGGGGGGGSHYDVPFQFGFTFRSPDDVFREFF 105          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 90/308 (29.22%), Postives = 128/308 (41.56%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA-------------DDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVG------GPKKAPPIEN-----RLPCTLEELYKGTTKKIKIYRKIV--DINGNTIK-----------------------VEEILTINVKP-------------------GWKKG---------------TRITFEEKGNV-QQNVKPADVVFIVDEKPHSVFTRDGNDLI 683
            M  DYY+ILGV R+A  D++KKAY K+A K++PDK PDN KEAE K   V EAYEVLS+  KR  +D +G       +A             +DIFS + D                    A      F  F  VF  G      G +++  I+      RL  TLEE+ KG  K IKI + +   + NG   K                         + + I+V P                   G K+G                 +T + +GN   +   P D++ +++EKPH +F R+G+D+I
Sbjct:    1 MKRDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEKFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGSGPGGAGYGDINDIFSAFNDM------------FSGGGGRARTGGSPFSGFEDVFSGGFSGSGSGRRRSAGIQGTDLKIRLKLTLEEIAKGVEKTIKIKKLVTCRECNGTGSKSGKTEICPTCHGSGEVRQATKTMFGQFMNISVCPTCGGEGRVVKDRCPSCYGEGIKQGEATVKITVPAGVQDGNYLTLQGQGNAGPRGGAPGDLIVVIEEKPHELFKRNGDDII 295          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 50/101 (49.50%), Postives = 63/101 (62.38%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP------QGSP-----------RSADDIFSEYF 272
            +YY +LGV RNAS +D+KKAY K+A KW+PDK PDNK EAE +   V EAYEVLSD +KR ++D YG         GS            RS DD+F ++F
Sbjct:    3 EYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLTGGGGGSHFDNPYEFGFTFRSPDDVFRDFF 103          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 87/294 (29.59%), Postives = 122/294 (41.50%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPK----------KAPPIENRLPCTLEELYKGTTKKIKIYRKIV--DINGNTIK------------------------------------------VEEILTINVKPGWKKG---TRITFE---EKGNV-----QQNVKP-----ADVVFIVDEKPHSVFTRDGNDLI 683
            M  DYY++LGV R+AS D++KKAY K+A +++PDK PDN K+AE     V EAYEVLS+  KR  +D +G       +A      Y                      A G    F  F  VF  GG                ++ RL  TLEE+ KG  K +KI ++IV  + NG+  K                                          V++  T     G K+G    ++T     + GN      Q N  P      D++ +++EKPH +F RDGND+I
Sbjct:    1 MKKDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDN-KDAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGAGGAYAGGATDFNDIFSAFNDMFGGGRARGGGAPF-GFEEVFGGGGGAGRRGRTSAGISGTDLKIRLKLTLEEIAKGVEKTLKIKKQIVCKECNGSGSKTGATEPCQTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCTACYGEGIKQGDVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFRRDGNDVI 292          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 44/96 (45.83%), Postives = 66/96 (68.75%), Query Frame = 3
Query:    6 EKMGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA--------DDIFSEY 269
            +K   DYY+ILGV R+A+ +++K+AY+++  +W+PD++P+N+KEAE +   + EAYEVLSDPQKRAM+D +G     P           DDIF E+
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFDDIFREF 97          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 41/90 (45.56%), Postives = 64/90 (71.11%), Query Frame = 3
Query:    6 EKMGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFD 275
            +K   DYY+ILGV R+A+ +++K+AY+++  +W+PD++P+N+KEAE +   + EAYEVLSDPQKRAM+D +G     P   +     +FD
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFD 91          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19
Identity = 38/67 (56.72%), Postives = 57/67 (85.07%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY+ILGV RNA+ ++++KAY+++  +W+PD++P+N+KEAE +   + EAYEVLSDPQKRAM+D +G
Sbjct:    7 DYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFG 73          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP-----------QGSP-------RSADDIFSEYF 272
            DYY++LGV ++AS +D+KKAY K+A KW+PDK P+NK+EAE +  +V EAYEVLSD +KR ++D +G               +P       R+ DD+F E+F
Sbjct:    3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYDRFGKEGLINGGGGGSHHDNPFEFGFTFRNPDDVFREFF 104          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB6_RAT1.698e-1948.54DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNJB6_MOUSE1.698e-1948.54DnaJ homolog subfamily B member 6 OS=Mus musculus ... [more]
DNJ6B_XENLA1.698e-1948.54DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNAJ_CHLTE1.698e-1929.22Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNJB6_XENTR2.218e-1949.50DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNAJ_CHLL22.896e-1929.59Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]
DNAJ_THESQ3.783e-1945.83Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA4.940e-1945.56Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THENN6.452e-1956.72Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNJB6_CHICK8.427e-1945.10DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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