CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 3
Query:  387 GGPKKAPPIENR-----LPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDL 680
            G     PP +N      L  +LE+L+ G TKK+KI R I+D +G ++K + IL I VKPGWK GT+I F  +G+ + +    D+ F++ EKPH VFTR G+DL
Sbjct:  194 GSRPSQPPAQNEVITRPLNVSLEDLFTGCTKKMKISRHIIDASGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDL 296          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG-----------MPQGSP-------RSADDIFSEYF 272
            A+YY++LGV  +AS +D+KKAY K+A +W+PDK PDNK+EAE K   V EAYEVLSD +KR+++D  G            P  SP       R+ +DIF E+F
Sbjct:    2 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFF 104          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA--------DDIFSEY 269
            DYY+ILGV R+A+ +++K+AY+++  +W+PD++P+N+KEAE +   + EAYEVLSDPQKRAM+D +G     P           +DIF E+
Sbjct:    7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPTYQETESGGFFEDIFKEF 97          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB7_MOUSE (DnaJ homolog subfamily B member 7 OS=Mus musculus GN=Dnajb7 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----QGSP------------RSADDIFSEYF 272
            DYY++LGV R AS +D+K+AY K+A KW+PDK P+NK+EAE K   V EAYEVLS+ +KR ++D YG      +G+             R ADD+F E F
Sbjct:    3 DYYEVLGVQRYASPEDIKRAYRKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNVEKRDIYDKYGKEGLDGRGASHLDDEREYRFTFRKADDVFKEIF 102          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEM4 (Chaperone protein dnaJ OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA----------DDIFSEYFDF 278
            DYY+ILGV RNA+ +++++AY+K+  KW+PD+  +NKK AE K   + EAYEVLSDP+KRAM+D +G     P +A          +DIF ++ DF
Sbjct:    5 DYYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKLAEEKFKEIQEAYEVLSDPEKRAMYDKFGYVGDVPPNAGGGFRGFGGFEDIFKDFGDF 100          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 77/265 (29.06%), Postives = 120/265 (45.28%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPD--KYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG------MPQGSPRSADDIFSEYFDFTI----------PHXXXXXXXXXXXXXNEA-FGEDDVFHSFNRVFV-----------------------VGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKP-ADVVFIVDEKPHSVFTRDGNDLIV 686
            DYY++LGV RNAS D++KKA+ ++A +++PD  K PD    AEAK   + EAYEVLSDP+KR+M+D +G       P   P S+ D FS  F+             P               EA FG +     F R+                         +G  ++  P+ N +  T  ++ +G    I I  +     G   +  +I T+ V PG    ++I    +G+      P  ++  ++D +PH  F R+GND+I+
Sbjct:    6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPD----AEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQRGADLRYTLSISFEEAVFGVEKTI-EFRRLETCPACRGSGAEPGTEPVRCPKCGGLGEIRQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGRVRQTRKI-TVRVPPGVDNSSQIRISGEGDAGPRGGPYGNLYVVIDVQPHPYFIREGNDIIL 264          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA---------------DDIFSEYFDF 278
            DYY+ILGV RNAS +++++AY+++  KW+PD+   N+KEAE K   + EAYEVLSDP+KRAM+D +G     P +A               +DIF ++ DF
Sbjct:    5 DYYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRKEAEEKFKEIQEAYEVLSDPEKRAMYDRFGYVGDVPPNAGSGGGFGGFGGFGGFEDIFKDFGDF 105          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB7_HUMAN (DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 51/120 (42.50%), Postives = 66/120 (55.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNR 374
            DYY++LG+ R AS +D+KKAY K+A KW+PDK P+NK+EAE K   V EAYEVLS+ +KR ++D YG     G     DD     F F  P              +  F ED +    NR
Sbjct:    3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDEKRDIYDKYGTEGLNGGGSHFDDECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLLNR 122          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLTR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---------MPQGSPRSAD--DIFSEYF 272
            DYYK+LGVDRNAS D++KKAY+K+A K++PD+ P N KEAE K   +  AYEVLSD +KRA +D YG           QG   + D  DIF+++F
Sbjct:    5 DYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGN-KEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEGASGGFDFSQGFGSAGDFSDIFNDFF 98          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PICTO (Chaperone protein dnaJ OS=Picrophilus torridus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 64/166 (38.55%), Postives = 83/166 (50.00%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF-------VVGGPKKAPPIE--NRLPCTLEELYKGTTKKIKIYR 482
            M  DYY ILGVDRNAS DD+KKA+ ++A K++PD  P N KEAE K   + EAYEVLSDPQKR  +D  G    +  S       + DFT  H                   DD+   FN+ F         GG    P ++   R+  +LE+ Y G +K +K  R
Sbjct:    1 MAKDYYAILGVDRNASQDDIKKAFRELAKKYHPDANPGN-KEAEEKFKEIAEAYEVLSDPQKRKQYDETGTTDFNAGSG----FNWQDFT--HF------------------DDINDIFNQFFGGNFGDTFFGGYTNQPDLDIYLRVNISLEDAYYGASKNVKYRR 141          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PSI1_SCHPO1.101e-1844.66Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DNJB8_HUMAN1.101e-1847.57DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNAJ_THEP11.101e-1846.15Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNJB7_MOUSE1.437e-1848.00DnaJ homolog subfamily B member 7 OS=Mus musculus ... [more]
DNAJ_THEM41.437e-1846.88Chaperone protein dnaJ OS=Thermosipho melanesiensi... [more]
DNAJ_ROSS11.877e-1829.06Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_THEAB2.452e-1844.55Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNJB7_HUMAN4.182e-1842.50DnaJ homolog subfamily B member 7 OS=Homo sapiens ... [more]
DNAJ_WOLTR4.182e-1851.58Chaperone protein dnaJ OS=Wolbachia sp. subsp. Bru... [more]
DNAJ_PICTO4.182e-1838.55Chaperone protein dnaJ OS=Picrophilus torridus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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