CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPS (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPP (Chaperone protein dnaJ OS=Yersinia pestis (strain Pestoides F) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPN (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPG (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPE (Chaperone protein dnaJ OS=Yersinia pestis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPB (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERPA (Chaperone protein dnaJ OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRQSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEDO (Chaperone protein dnaJ OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 51/164 (31.10%), Postives = 79/164 (48.17%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA---------DDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKA---PPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R++S  D+KKAY+++A K++PD+ P + K AEA    + EAYE+L+D  K+A +D +G     P             DIF + F                          D+F    R    GG ++A     +   L  +LEE  +G TK+++I
Sbjct:    5 DYYEVLGVGRDSSERDIKKAYKRLAMKFHPDRNPGD-KAAEASFKEIKEAYEILTDGDKKAAYDQFGHAGVDPNRGGGGHGGGDFGDIFGDVF-------------------------GDIFGGGRR----GGQRQAARGSDLRYNLELSLEEAVRGLTKELRI 138          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            M  DYYKILGV + AS  DLKKAY K+A +++PD   D  K+AE K   +  AY+VL D QKRA +D +G
Sbjct:    1 MSQDYYKILGVSKTASQADLKKAYLKLAKQYHPDTTDD--KDAEKKFKEINRAYDVLKDEQKRAAYDRFG 68          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYIN (Chaperone protein dnaJ OS=Psychromonas ingrahamii (strain 37) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG----MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG--PKKAPPIENRLPCTLEELYKGTTKKIKI 476
            D Y++LG+ R+A+  ++KKAY+++A K++PD+   N  E E K   V EAYE+L+D QK+A +D YG      QG     +  F + F                    + FG  D+F    R    GG  P++   +   +  TLEE  +G +K+I+I
Sbjct:    5 DCYEVLGISRDATEKEVKKAYKRLAMKYHPDRTSGN-DELEVKFKEVKEAYEILNDSQKKAAYDQYGHDGVNQQGRGGFDNSDFGDQF-------------------GDIFG--DIFGGGRRGGGGGGQRPQQGSDLRYNMELTLEEAVRGISKEIQI 140          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_YERPS2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPP2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pestis (strain ... [more]
DNAJ_YERPN2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_YERPG2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_YERPE2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pestis GN=dnaJ ... [more]
DNAJ_YERPB2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_YERPA2.010e-1231.25Chaperone protein dnaJ OS=Yersinia pestis bv. Anti... [more]
DNAJ_SHEDO2.010e-1231.10Chaperone protein dnaJ OS=Shewanella denitrificans... [more]
DNAJ_RICAH2.010e-1252.86Chaperone protein dnaJ OS=Rickettsia akari (strain... [more]
DNAJ_PSYIN2.010e-1232.28Chaperone protein dnaJ OS=Psychromonas ingrahamii ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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