CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEU2 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LGV+R +S  DLKKAY ++A K +PD+ PD+ K +E       EAYEVLSD  KRA +D YG
Sbjct:    5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDD-KASEELFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEHT (Chaperone protein dnaJ OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LGV ++AS  D+KKAY+++A K++PD+     KE E K   V EAYE+L+D QKR  +D YG
Sbjct:    5 DYYEVLGVSKDASERDIKKAYKRLAMKYHPDR-TSGDKELETKFKEVKEAYEILTDAQKRQTYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA6 (Chaperone protein dnaJ OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LGV+++AS  D+KKAY+++A K++PD+     K  E K   V EAYE+L+D QKRA +D YG
Sbjct:    5 DYYEVLGVEKSASERDIKKAYKRLAMKYHPDR-TQGDKAMEEKFKEVQEAYEILTDSQKRAAYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PSE14 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LGV+R +S  DLKKAY ++A K +PD+ PD+ K +E       EAYEVLSD  KRA +D YG
Sbjct:    5 DYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDD-KASEELFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PECCP (Chaperone protein dnaJ OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKA---PPIENRLPCTLEELYKGTTKKIKI 476
            DYY+ LGV ++A   ++KKAY+++A K++PD+ P +  EAEAK   + EAYE+L D QKRA +D YG     QG    +   F                        + FG+      F  +F  G  ++A     +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYESLGVAKSADEREIKKAYKRLAMKYHPDRNPGD-SEAEAKFKEIKEAYEILIDSQKRAAYDQYGHAAFEQGGMGGSGGGFG----------------GGGADFGDIFGD-----VFGDIFGGGRRQRASRGSDLRYNMELTLEEAVRGVTKEIRI 140          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCAT (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY+ILG+ ++A   ++KKAY+K+A K++PD+     K AE K   + EAYE+L + +KR+ +D YG      G   S    F+   DF                 ++ FG  DVF            KK   +   +  TLEE  KG  K+I+I
Sbjct:    5 DYYQILGIPKSAEEREIKKAYKKLAMKYHPDR-NQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADF-----------------SDIFG--DVFGDIFGGNRTQRAKKGADLCYNMEITLEEAVKGIKKEIQI 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCAI (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY+ILG+ ++A   ++KKAY+K+A K++PD+     K AE K   + EAYE+L + +KR+ +D YG      G   S    F+   DF                 ++ FG  DVF            KK   +   +  TLEE  KG  K+I+I
Sbjct:    5 DYYQILGIPKSAEEREIKKAYKKLAMKYHPDR-NQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADF-----------------SDIFG--DVFGDIFGGNRTQRAKKGADLCYNMEITLEEAVKGIKKEIQI 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCA5 (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY+ILG+ ++A   ++KKAY+K+A K++PD+     K AE K   + EAYE+L + +KR+ +D YG      G   S    F+   DF                 ++ FG  DVF            KK   +   +  TLEE  KG  K+I+I
Sbjct:    5 DYYQILGIPKSAEEREIKKAYKKLAMKYHPDR-NQGDKTAEGKFKEIKEAYEILINEEKRSAYDQYGHAAFENGQSNSTYSTFTNSADF-----------------SDIFG--DVFGDIFGGNRTQRAKKGADLCYNMEITLEEAVKGIKKEIQI 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTN (Chaperone protein dnaJ OS=Bacteroides thetaiotaomicron GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP---------------QGSPRSADDIFSEYFD 275
            DYY++L V + A+ +++KKAY K A +++PDK P + KEAE K     EAY+VLS+P KR+ +D +G                  G   S DDIFS + D
Sbjct:    6 DYYEVLEVTKTATVEEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSNPDKRSRYDQFGHAGVSGAAGNGGPFGGFGGEGMSMDDIFSMFGD 104          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTPJ (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSA-------------DDIFSEYF 272
            DYY++LG+ + AS +D+K+AY+++A+K +PDK     K+AE K   + EAYEVL D +KRA +D YG     QG                  +DIFSE F
Sbjct:    5 DYYEVLGLQKGASENDIKRAYKRLASKHHPDK-NQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYGHAAFEQGGGAGGFGGGFGGGGFGGFEDIFSEMF 103          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEU22.010e-1253.73Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_PSEHT2.010e-1250.75Chaperone protein dnaJ OS=Pseudoalteromonas halopl... [more]
DNAJ_PSEA62.010e-1250.75Chaperone protein dnaJ OS=Pseudoalteromonas atlant... [more]
DNAJ_PSE142.010e-1253.73Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_PECCP2.010e-1232.91Chaperone protein dnaJ OS=Pectobacterium carotovor... [more]
DNAJ_BUCAT2.010e-1232.90Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BUCAI2.010e-1232.90Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BUCA52.010e-1232.90Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BACTN2.010e-1240.00Chaperone protein dnaJ OS=Bacteroides thetaiotaomi... [more]
DNAJ_ACTPJ2.010e-1241.00Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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