CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTP2 (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSA-------------DDIFSEYF 272
            DYY++LG+ + AS +D+K+AY+++A+K +PDK     K+AE K   + EAYEVL D +KRA +D YG     QG                  +DIFSE F
Sbjct:    5 DYYEVLGLQKGASENDIKRAYKRLASKHHPDK-NQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYGHAAFEQGGGAGGFGGGFGGGGFGGFEDIFSEMF 103          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCTU (Chaperone protein dnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 54/164 (32.93%), Postives = 73/164 (44.51%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIEN---------RLPCTLEELYKGTTKKIKI 476
            M  DYY +LGV +NAS  D+K+AY K+A + +PD  PD  + A+AK   +  AYEVLSDP KR + D  G P  S  +  + F  +                        G  DVF +F      GG     PI           R+   LEE   G TK++ +
Sbjct:    1 MARDYYGLLGVSKNASDADIKRAYRKLARELHPDVNPD--EAAQAKFKEISVAYEVLSDPDKRRIVDLGGDPLESAAAGGNGFGGF-----------------------GGLGDVFEAFFGGGFGGGAASRGPIGRVRPGSDSLLRMRLDLEECATGVTKQVTV 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCBO (Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 54/164 (32.93%), Postives = 73/164 (44.51%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIEN---------RLPCTLEELYKGTTKKIKI 476
            M  DYY +LGV +NAS  D+K+AY K+A + +PD  PD  + A+AK   +  AYEVLSDP KR + D  G P  S  +  + F  +                        G  DVF +F      GG     PI           R+   LEE   G TK++ +
Sbjct:    1 MARDYYGLLGVSKNASDADIKRAYRKLARELHPDVNPD--EAAQAKFKEISVAYEVLSDPDKRRIVDLGGDPLESAAAGGNGFGGF-----------------------GGLGDVFEAFFGGGFGGGAASRGPIGRVRPGSDSLLRMRLDLEECATGVTKQVTV 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_YERP3 (Chaperone protein dnaJ OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVF--VVGGPK------KAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+A   ++KKAY+++A K++PD+  ++ K AE K     EAYE+L+D QKRA +D YG                      H                 G  D    F  VF  + GG +      +   +   +  TLEE  +G TK+I+I
Sbjct:    5 DYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRKSED-KNAEEKFKEAKEAYEILTDAQKRAAYDQYG----------------------HAAFEQGGMGGGGFGGGGGGADFSDIFGDVFGDIFGGGRRQQRASRGSDLRYNMDLTLEEAVRGVTKEIRI 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEPW (Chaperone protein dnaJ OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPR-------SAD--DIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKA---PPIENRLPCTLEELYKGTTKKIKI 476
            D+Y++LGV R+AS  ++KKAY+++A K++PD+ P + KEAEA    V EAYE+L+D  K+A +D +G     P         AD  D+F + F                          D+F    R    GG ++A     +   L  +LEE  KG +K+++I
Sbjct:    5 DFYEVLGVGRDASEREVKKAYKRLAMKFHPDRNPGD-KEAEASFKEVKEAYEILTDSDKKAAYDQFGHAGVDPNRGGGGHGGADFGDVFGDVF-------------------------GDIFGGGRR---GGGQRQAARGSDLRYNLELSLEEAVKGLSKELRI 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_SERP5 (Chaperone protein dnaJ OS=Serratia proteamaculans (strain 568) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 50/160 (31.25%), Postives = 79/160 (49.38%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY--------GMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY+ILGV + A   ++KKAY+++A K++PD+  + +++AEA+   + EAYE+L+D QKRA +D Y        GM  G        FS+ F                    + FG  D+F    R        +   +   +  +LEE  +G TK+I+I
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKFHPDR--NQEQDAEARFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGGFGGGAEFSDIF-------------------GDVFG--DIFGGGRR----QRASRGSDLRYNMELSLEEAVRGVTKEIRI 137          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RICCK (Chaperone protein dnaJ OS=Rickettsia canadensis (strain McKiel) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 54/172 (31.40%), Postives = 76/172 (44.19%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG----MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENR---------LPCTLEELYKGTTKKIKIYRKI 488
            M  DYY+ILGV + AS  +LKKAY K+A +++PD        AE K   +  AY+VL D QKRA +D +G      Q S R A    S +                    N+ FG  D F  F     +GG +++ P  ++         L   LEE + G  K I    ++
Sbjct:    1 MSQDYYQILGVSKTASSAELKKAYHKLAKQYHPDNAAAGDTNAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRRGAGGGTSSF----------------HPDINDIFG--DFFSDF-----MGGSRRSRPTSSKVRGSDLKYDLTINLEEAFHGIEKNISFSSEV 149          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOSK (Chaperone protein dnaJ OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 56/168 (33.33%), Postives = 78/168 (46.43%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ------GSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGE--DDVFHSFNRVFVVGGPKKAP--------PIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R AS D+LKKAY   A + +PD+  DN  +AEA+   V EAY+VL D  K+A +D YG         G  R+    + +  DF                   AF +  +D+F  F     +GG   AP         +   L  TL+E Y+G  K I +
Sbjct:    5 DYYEVLGVSRTASADELKKAYRTKAKELHPDRNADN-PQAEAQFKEVNEAYDVLRDADKKAAYDRYGHAAFEGGMGGGARAGG--YGQQGDFA-----------------SAFSDVFEDLFGDF-----MGGRGGAPRSRAQRGSDLRYNLRVTLDEAYRGVQKTINV 147          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_POLSJ (Chaperone protein dnaJ OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDK-YPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY  LGV +NAS DD+KKAY K+A K +PD+   D  K +E K     EAYEVLSD  KR  +D YG
Sbjct:    5 DYYDTLGVPKNASDDDIKKAYRKLAMKHHPDRNQGDKSKVSEEKFKEAKEAYEVLSDENKRMAYDQYG 72          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_METNO (Chaperone protein dnaJ OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 55/164 (33.54%), Postives = 77/164 (46.95%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM---------PQGSPRSAD--DIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFN-RVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R A   +LK A+ K+A  ++PD+ P + KEAE K   V EAY+ LSD QKRA +D +G          P G    AD  D  S+ FD                     FG+     +   R    GG ++   +   L  TLEE + G T+ I++
Sbjct:    5 DYYEVLGVARTAGEGELKSAFRKLAMAYHPDRNPGD-KEAEIKFKEVNEAYQTLSDGQKRAAYDRFGHAAFSQGAGGPGGPGFGADFGDFMSDIFD-------------------TFFGDARAGGAAGARGGRAGGRERGADLRYNLEITLEEAFTGKTETIRL 148          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ACTP22.010e-1241.00Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]
DNAJ2_MYCTU2.010e-1232.93Chaperone protein dnaJ 2 OS=Mycobacterium tubercul... [more]
DNAJ2_MYCBO2.010e-1232.93Chaperone protein dnaJ 2 OS=Mycobacterium bovis GN... [more]
DNAJ_YERP32.626e-1231.25Chaperone protein dnaJ OS=Yersinia pseudotuberculo... [more]
DNAJ_SHEPW2.626e-1232.32Chaperone protein dnaJ OS=Shewanella piezotolerans... [more]
DNAJ_SERP52.626e-1231.25Chaperone protein dnaJ OS=Serratia proteamaculans ... [more]
DNAJ_RICCK2.626e-1231.40Chaperone protein dnaJ OS=Rickettsia canadensis (s... [more]
DNAJ_RHOSK2.626e-1233.33Chaperone protein dnaJ OS=Rhodobacter sphaeroides ... [more]
DNAJ_POLSJ2.626e-1254.41Chaperone protein dnaJ OS=Polaromonas sp. (strain ... [more]
DNAJ_METNO2.626e-1233.54Chaperone protein dnaJ OS=Methylobacterium nodulan... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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