CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ-GSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSF---NRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYR 482
            DYY+ILG+ ++AS +D+KK Y K+A +++PD+  D    AE K   + EAY VLSD +KRA +D +G     +  SA+DIF    DF                     G  D+F  F    R     GP++   ++  L  T EE   G  K I I R
Sbjct:    6 DYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKD--PGAEDKFKEISEAYAVLSDTEKRAQYDRFGHAGIDNQYSAEDIF-RGADFG--------------------GFGDIFEMFFGGGRRGGPMGPRRGSDLQYDLYITFEEAAFGVRKDIDIPR 140          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 49/167 (29.34%), Postives = 84/167 (50.30%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY---GMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG--------PKKAPPIENRLPCTLEELYKGTTKKIKIYRKI 488
            DYY++LG+ + AS +++K+AY+K++ K++PD   + + +AE K   + EAYEVLSD QK+A +D +   GM QG+     D F  +  F                       +D+F SF      GG        P++   ++ ++  T EE   G  K+I + +++
Sbjct:    5 DYYEVLGLSKGASKEEIKRAYKKLSKKYHPD--INKEADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHAGMGQGAGFGGQD-FGGFGGF-----------------------EDIFSSF-----FGGGARRDPNAPRQGNDLQYQMNVTFEEAVFGAEKEISVKKEV 140          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LG+ ++AS D++KKAY K++ +++PD   + +  A+ K   + EAYEVLSD QKRA +D YG
Sbjct:    5 DYYEVLGISKSASADEIKKAYRKLSKQYHPD--INKEAGADEKFKEISEAYEVLSDSQKRAQYDQYG 69          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBL (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 3
Query:   24 YYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY----------GMPQGSPRSADDIFSEYFD 275
            YY ILGV ++A+ +++K AY K+A K++PDK   N KE+E K     EAYE+L DP+KR  +D +          G  QG+     DIF ++ D
Sbjct:    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQGAYTDFSDIFGDFGD 98          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBJ (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 3
Query:   24 YYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY----------GMPQGSPRSADDIFSEYFD 275
            YY ILGV ++A+ +++K AY K+A K++PDK   N KE+E K     EAYE+L DP+KR  +D +          G  QG+     DIF ++ D
Sbjct:    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQGAYTDFSDIFGDFGD 98          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_HAES2 (Chaperone protein dnaJ OS=Haemophilus somnus (strain 2336) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY+ILGV + A   ++K+AY+++A K++PD+     KE+E K   + EAYEVL+D +KRAM+D YG
Sbjct:    5 DYYEILGVQKGADDKEIKRAYKRLAMKYHPDR-TKGDKESEEKFKEINEAYEVLADKEKRAMYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_HAES1 (Chaperone protein dnaJ OS=Haemophilus somnus (strain 129Pt) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY+ILGV + A   ++K+AY+++A K++PD+     KE+E K   + EAYEVL+D +KRAM+D YG
Sbjct:    5 DYYEILGVQKGADDKEIKRAYKRLAMKYHPDR-TKGDKESEEKFKEINEAYEVLADKEKRAMYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_DEIPR (Chaperone protein dnaJ OS=Deinococcus proteolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG----MPQGSPR 242
            DYY++LGV R+AS  D+K AY K+A +++PDK   ++  AE K   + EAY VLSDPQKR  +D +G    +P   PR
Sbjct:    5 DYYEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAE-KFKEIGEAYAVLSDPQKRQAYDQFGHTGQVPPALPR 81          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOPB (Chaperone protein dnaJ OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            +DYY+ILG+ +NA   ++KK+Y+++A K++PD+ P N   AE K   + EAYEVLS+ +KRA +D YG
Sbjct:    4 SDYYEILGISKNADEREIKKSYKRLAMKFHPDRNPGN-TTAETKFKEIKEAYEVLSNSEKRAAYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 80/282 (28.37%), Postives = 111/282 (39.36%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ--------------GSPRSADDIFSEYF--------DFTIPHXXXXXXXXXXXXXNEA-FGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYK-----------------------------GTTKKIKIYRKIVDINGNTIKVEEILTINVK--PGWKKGTRITFEEKGNVQQNVKPA-DVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            DYY++LG+ + AS D++KKAY ++A K++PD     ++ A  K   V EAYEVLSD QKRA +D +G                 G     +DIFS +F        D   P               EA FG++      N    V  P          P T +E  K                             GT + IK   K    +G+  KV +   INVK   G   G +I    KG    N  PA D+  +V  + H  F R+G+ +I    +T
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPD--VSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGADLQYQVTLEFEEAIFGKE-----LNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK--EKCTTCHGSG-KVRKRKKINVKIPAGIDNGQQIRVSGKGEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLT 276          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_METAC2.626e-1234.81Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNAJ_MACCJ2.626e-1229.34Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]
DNAJ_LISW62.626e-1247.76Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_LEPBL2.626e-1240.43Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_LEPBJ2.626e-1240.43Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_HAES22.626e-1249.25Chaperone protein dnaJ OS=Haemophilus somnus (stra... [more]
DNAJ_HAES12.626e-1249.25Chaperone protein dnaJ OS=Haemophilus somnus (stra... [more]
DNAJ_DEIPR2.626e-1247.44Chaperone protein dnaJ OS=Deinococcus proteolyticu... [more]
DNAJ_BLOPB2.626e-1248.53Chaperone protein dnaJ OS=Blochmannia pennsylvanic... [more]
DNAJ_BACHK2.626e-1228.37Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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