CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8368 contig Csv1_Contig8368:62..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJC5_RAT (DnaJ homolog subfamily C member 5 OS=Rattus norvegicus GN=Dnajc5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            G   Y +LG+D+NA+ DD+KK+Y K+A K++PDK PDN  EA  K   +  A+ +L+D  KR ++D YG
Sbjct:   13 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYG 80          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJC5_MOUSE (DnaJ homolog subfamily C member 5 OS=Mus musculus GN=Dnajc5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            G   Y +LG+D+NA+ DD+KK+Y K+A K++PDK PDN  EA  K   +  A+ +L+D  KR ++D YG
Sbjct:   13 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYG 80          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJC5_HUMAN (DnaJ homolog subfamily C member 5 OS=Homo sapiens GN=DNAJC5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            G   Y +LG+D+NA+ DD+KK+Y K+A K++PDK PDN  EA  K   +  A+ +L+D  KR ++D YG
Sbjct:   13 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYG 80          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJC5_BOVIN (DnaJ homolog subfamily C member 5 OS=Bos taurus GN=DNAJC5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   15 GADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            G   Y +LG+D+NA+ DD+KK+Y K+A K++PDK PDN  EA  K   +  A+ +L+D  KR ++D YG
Sbjct:   13 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYG 80          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_TETHA (Chaperone protein dnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 71/280 (25.36%), Postives = 112/280 (40.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG-----------------------MPQGSPRSADDIFSEYF------DFTIPHXXXXXXXXXXXXXNEA-FGED-DVFHSFNRVFVVGGPKKAPP--------------------------IENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPH---SVFTRDGNDL 680
            DYY++LGVD+ AS D++KKAY K++ K++PD   + + +AE K  +  +    LSDPQKRA +D YG                          G     +DIF  +F      D   P               EA FG+D +V +  N V    G   A P                          +  R  C   ++  GT K+IK   +     G+  K   +  ++V  G + G ++    +G    N  P   +++V    H   ++F RDG+++
Sbjct:    6 DYYEVLGVDKGASDDEIKKAYRKLSKKYHPD--VNQEADAEEKFKKFQKPMNTLSDPQKRAAYDQYGHAGADANFGGGGAGGFGGFGGGFSDAGGFGGFEDIFESFFGGGRSADPNAPRQGDDLQYSINLTFEEAVFGKDTEVSYKRNEVCHTCGGNGAKPGTQPETCHKCKGSGTINAERQTPLGRVMTRQTC---DVCHGTGKEIKEVCETCHGTGHEKKTHSV-NVSVPAGVEDGQQMRLANQGEAGTNGGPYGDLYVVLYCSHETCNIFDRDGSEI 279          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEFN (Chaperone protein dnaJ OS=Shewanella frigidimarina (strain NCIMB 400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP-----QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKA---PPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+ S  ++KKAY+++A K++PD+ P + K AEA    + EAYE+L+D  K+A +D +G       +G        F + F                    + FG  D+F    R    GG ++A     +   L  +LEE  +G TK+++I
Sbjct:    5 DYYEVLGVGRDTSEREIKKAYKRLAMKFHPDRNPGD-KAAEASFKEIKEAYEILTDSDKKAAYDQFGHAGVDPNRGGHGGGQGDFGDIF-------------------GDVFG--DIFGGGRR---GGGQRQAARGSDLRYNLELSLEEAVRGLTKELRI 139          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RUTMC (Chaperone protein dnaJ OS=Ruthia magnifica subsp. Calyptogena magnifica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGS 236
            DYY+ILGV +NA    +KKAY+++A K +PD+  ++K  AE K   + +AY +LSD QKR  +D +G   G+
Sbjct:    5 DYYEILGVAKNADAKQIKKAYKRLAMKHHPDRVKNDKASAEKKFKEIQKAYAILSDVQKRQAYDQFGHVGGN 76          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RICFE (Chaperone protein dnaJ OS=Rickettsia felis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 52/167 (31.14%), Postives = 75/167 (44.91%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAP--------PIENRLPCTLEELYKGTTKKIKIYRKI 488
            M  DYY+ILGV + AS  DLKKAY K+A +++PD    + K+AE K   +  AY+VL D QKRA +D +G              + F +                 N+ FG  D F  F     +GG ++ P         ++  L   LEE + G  K I    ++
Sbjct:    1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPD--TTDAKDAEKKFKEINSAYDVLKDEQKRAAYDRFG-------------HDTFQYQQSRGGGGNHGGFHPDINDIFG--DFFSDF-----MGGGRRKPTSSKARGSDLKYDLTINLEEAFHGIEKNISFSSEV 145          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 50/154 (32.47%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSF---NRVFVVGGPKKA-PPIENRLPCTLEELYKGTTKKI 470
            DYY++LGV R AS +++K+AY K+  K++PD  P + K AE K+  + EAY++L D +KR+ +D  G  Q    S    + ++  FT                N+ F  +++F  F    R       KKA   ++  +  TLEE + G TK I
Sbjct:    5 DYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGD-KNAEQKIKNINEAYDILKDEKKRSAYDQLG-HQAFKNSGGGNYQQHHGFT-----------GGIDPNDIF--ENIFGDFMGARRSSKTAFSKKAGANLKYDISLTLEEAFYGVTKII 143          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12
Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKY----PDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LG+ +NAS  D+K+A+ K+A +++PD++       +K+ E K   V EAYEVLSD +KR ++D +G
Sbjct:    7 DYYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYDQFG 77          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJC5_RAT7.639e-1246.38DnaJ homolog subfamily C member 5 OS=Rattus norveg... [more]
DNJC5_MOUSE7.639e-1246.38DnaJ homolog subfamily C member 5 OS=Mus musculus ... [more]
DNJC5_HUMAN7.639e-1246.38DnaJ homolog subfamily C member 5 OS=Homo sapiens ... [more]
DNJC5_BOVIN7.639e-1246.38DnaJ homolog subfamily C member 5 OS=Bos taurus GN... [more]
DNAJ_TETHA7.639e-1225.36Chaperone protein dnaJ OS=Tetragenococcus halophil... [more]
DNAJ_SHEFN7.639e-1231.25Chaperone protein dnaJ OS=Shewanella frigidimarina... [more]
DNAJ_RUTMC7.639e-1244.44Chaperone protein dnaJ OS=Ruthia magnifica subsp. ... [more]
DNAJ_RICFE7.639e-1231.14Chaperone protein dnaJ OS=Rickettsia felis GN=dnaJ... [more]
DNAJ_ORITB7.639e-1232.47Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_MYCGE7.639e-1243.66Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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