CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJH_SYNY3 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803) GN=slr0093 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 73/240 (30.42%), Postives = 107/240 (44.58%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFD----------TYGMPQGS--PRSADDI----FSEY--FDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPK-KAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLI 683
            DYY+ILGV + AS  ++KK + K+A K++PDK P + K AE K   + EAYEVLSDP+KR  +D          T G P GS  P    D     FS+Y  FD  I                 ++        FN     G  +  A   E  L  TL E ++G  K++ +              EE++T+ +  G K G+R+    KG      +  D+   +   PH  F  +G++L+
Sbjct:    8 DYYQILGVTKTASEAEIKKQFRKLALKYHPDKNPGD-KAAEEKFKEISEAYEVLSDPEKRQKYDQFGRYWQQAGTAGQPSGSYGPGVGVDFGGFDFSQYGNFDEFINELLGRFNTPGGGGQRTSYSYSTGGPGFNDFGGFGNAQAPAGDREATLQLTLAEAFRGVEKRLNL-------------GEEMVTVRIPAGAKNGSRVRVRGKGMASPYGQRGDLYLNLQLTPHPFFQFEGDNLV 233          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 67/190 (35.26%), Postives = 91/190 (47.89%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG--------MPQGSP------RSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV-DI-NGNTIKVEEILT 533
            M  DYY++LGV R+A+ D++KKAY K+A K++PDK PDN  EAE K     EAYEVLS+  KR  +D +G          QG P          DIFS + D                     FG +DVF                 ++ RL  +LEE+ KG  K +KI +++  D+ NG   K  E+ T
Sbjct:    1 MKRDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDN-SEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSASSQGGPFGGGGTGDLGDIFSAFNDM---------FGGGARGGGSPFGFEDVFSGGGGRRSRSAGVSGSDLKIRLKLSLEEIAKGVEKTLKIKKQVACDVCNGTGSKTGELET 180          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 76/264 (28.79%), Postives = 120/264 (45.45%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPD--KYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM--PQGSP-----RSAD---DIFSEYFDFTI------PHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFV-----------------------VGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKP-ADVVFIVDEKPHSVFTRDGNDLIV 686
            DYY++LGV RNAS D++KKA+ ++A +++PD  K PD    AEAK   + EAYEVLSDP+KR+M+D +G   P  +P      SAD    IF  +F  T+      P               EA    +    + R+                         +G  ++  P+ N +  T  ++ +G    I I  +     G  I+    +T+ V PG     +I    +G+      P  ++  ++D +PH  F R+GND+I+
Sbjct:    6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPD----AEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFASADPFSSIFETFFGGTMRGTQRGPQRGADLRYTLSISFEEAIFGVEKTIEYRRMETCPACRGSGAEPGTEPVRCPKCGGLGEIRQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGR-IRQTRKITVRVPPGVDSSAQIRISGEGDAGPRGGPYGNLYVVIDVQPHPFFIREGNDIIL 264          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG-----PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV 491
            DYY++LGV +NA+ D+LKKAY K A +++PDK P + KEAE     V EAY+VLSDPQKR+ +D +G             G   S +DIFS + D                     FG    F  F     +GG      ++   +  R+  +L ++ KG  KK+K+ +++V
Sbjct:    6 DYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGD-KEAEEHFKEVAEAYDVLSDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDL--------------------FGG---FGGFGGFSDMGGGSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVV 153          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB3_MACFU (DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata GN=DNAJB3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM--PQGS---PRSADDIFSEYFDFTIP 287
            A+YY++LGV      +D+KKAY K+A KW+PDK PDNK+EAE +  +V EAYEVLSD +KR ++D YG    +GS    R  +D F   F F  P
Sbjct:    2 ANYYEVLGVQVQRFPEDIKKAYRKLALKWHPDKNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYDRYGEAGAEGSCAVGRPFEDPFEYIFSFRDP 96          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB2_HUMAN (DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17
Identity = 48/106 (45.28%), Postives = 61/106 (57.55%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP---------------QGSP------RSADDIFSEYF 272
            A YY+IL V R+AS DD+KKAY + A +W+PDK PDNK+ AE K   V EAYEVLSD  KR ++D YG                  G P      RS +++F E+F
Sbjct:    2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFF 107          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB3_HUMAN (DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQG-----SPRSADDIFSEYFDFTIP 287
            DYY++L V R AS + +KKAY K+A KW+PDK P+NK+EAE +  +V EAYEVLSD +KR ++D YG           R  +D F   F F  P
Sbjct:    3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGEAGAEGGCTGGRPFEDPFEYVFSFRDP 96          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEA-EAKLNRVCEAYEVLSDPQKRAMFDTY---GMPQGS--PRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG----------PKKAPPIENRLPCTLEELYKGTTKKIKIYR 482
            +YY+ LGV  + + D+LKKAY KMA K++PDK     K+A EAK   + EAYEVLSDP+KR M+D+Y   GM +      SA+D+FS +F                       G+D    SF  +  +GG           +K   IE+ +  +LEELY G   KI I R
Sbjct:    6 EYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMKESGFHASSAEDLFSHFF--------GAGGGGGGFSFGGGGGDDFGGFSFGNMGGMGGMGGMGGGHKKRRKGEDIEHEMNRSLEELYNGKLVKISISR 167          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----------QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGP-----KKAPPIENRLPCTLEELYKGTTKKIKIYRKIV 491
            DYY++LGV +NA+ D+LKKAY K A +++PDK P + KEAE     V EAY+VLSDP+KR+ +D +G             G   S +DIFS + D                     FG    F  F     +GG      ++   +  R+  +L ++ KG  KK+K+ +++V
Sbjct:    6 DYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGD-KEAEEHFKEVAEAYDVLSDPEKRSRYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDL--------------------FGG---FGGFGGFSDMGGSSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVV 153          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DJB10_MOUSE (DnaJ homolog subfamily B member 10 OS=Mus musculus GN=Dnajb10 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            A YY+IL V R+AS DD+KKAY K A +W+PDK PDNK+ AE K   V EAYEVLSD  KR ++D YG
Sbjct:    2 ASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYG 69          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJH_SYNY35.462e-1830.42DnAJ-like protein slr0093 OS=Synechocystis sp. (st... [more]
DNAJ_PROA27.134e-1835.26Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_ROSCS9.317e-1828.79Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_PORGI1.217e-1734.30Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNJB3_MACFU1.589e-1749.47DnaJ homolog subfamily B member 3 OS=Macaca fuscat... [more]
DNJB2_HUMAN1.589e-1745.28DnaJ homolog subfamily B member 2 OS=Homo sapiens ... [more]
DNJB3_HUMAN2.076e-1747.87DnaJ homolog subfamily B member 3 OS=Homo sapiens ... [more]
DNJA1_DICDI2.076e-1737.65DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ_PORG32.711e-1733.72Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DJB10_MOUSE2.711e-1761.76DnaJ homolog subfamily B member 10 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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