CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K +PD+ PDN KEAE K   V EAYE+LSDP+K+A +D YG     P  A
Sbjct:    5 DYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDN-KEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMA 79          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHS-FNRVFVVG----GPKKAPPIENRLPCTLEELYKGTTKKIKIYR 482
            DYY+ILG+D+ AS  D+KKA+ K+A K++PD+ P++KK AE K   + EAY+VL+DPQK+A +D +G    +       F   FDF                 ++  G  D+F S F   F  G    GP++   +E  L  T EE   G  K+I + R
Sbjct:    5 DYYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKK-AEEKFKEINEAYQVLTDPQKKAQYDQFGTTDFNGGGFQGGFGG-FDF-----------------SDLGGFGDIFDSFFGGGFSSGRRKNGPERGSDLEYTLSLTFEEAVFGVEKEISVTR 144          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 79/291 (27.15%), Postives = 123/291 (42.27%), Query Frame = 3
Query:   24 YYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG----PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV-----DINGNTIKVE----------EILTINVKPGWKK--------------------------GTRITFEEK---------------------GNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTI 698
            YY ILGV  +AS +++KKAY K+A K++PDK PD  +    K   + +AYEVLSDP+KR ++D     QG  ++  +  S    F+ P                     D+F  F   F  GG     ++   + ++L  TLE+LY G TKK+ + + ++      I G    VE          ++    + PG  +                          G ++T E+K                     G+ +  + P DV+ ++D+K HSVF R G DLI+   I
Sbjct:    7 YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGE----KFKLISQAYEVLSDPKKRDIYD-----QGGEQAIKEGGSGSPSFSSPM--------------------DIFDMF---FGGGGRMTRERRGKNVVHQLSVTLEDLYNGITKKLALQKNVICEKCEGIGGKKGSVEKCPLCKGRGMQVHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKI 265          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: CBPA_COXBU (Curved DNA-binding protein OS=Coxiella burnetii GN=cbpA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 69/241 (28.63%), Postives = 107/241 (44.40%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG------------PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI-NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKP-ADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            DYYKILGV R+A+ D++KK+Y K+A K++PD    ++  AE K  +V EAYEVL D +KR  +D  G            + +   FT P                  G  D F S     + GG             ++     +R+  +LEE + G+T+ + +   IVD   G        L I +  G  +G +I  + +G       P  D+   +   PHS+FT +G D+ +   +T
Sbjct:    5 DYYKILGVSRDATADEIKKSYRKLARKYHPD--VSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGSG----------WKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFES-----LFGGLGQEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVDYQTGQVTSKTRQLRIKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVT 228          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: CBPA_COXBR (Curved DNA-binding protein OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=cbpA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 69/241 (28.63%), Postives = 107/241 (44.40%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG------------PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI-NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKP-ADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            DYYKILGV R+A+ D++KK+Y K+A K++PD    ++  AE K  +V EAYEVL D +KR  +D  G            + +   FT P                  G  D F S     + GG             ++     +R+  +LEE + G+T+ + +   IVD   G        L I +  G  +G +I  + +G       P  D+   +   PHS+FT +G D+ +   +T
Sbjct:    5 DYYKILGVSRDATADEIKKSYRKLARKYHPD--VSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGSG----------WKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFES-----LFGGLGQEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVDYQTGQVTSKTRQLRIKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVT 228          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: CBPA_COXBN (Curved DNA-binding protein OS=Coxiella burnetii (strain Dugway 5J108-111) GN=cbpA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 69/241 (28.63%), Postives = 107/241 (44.40%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGG------------PKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDI-NGNTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKP-ADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            DYYKILGV R+A+ D++KK+Y K+A K++PD    ++  AE K  +V EAYEVL D +KR  +D  G            + +   FT P                  G  D F S     + GG             ++     +R+  +LEE + G+T+ + +   IVD   G        L I +  G  +G +I  + +G       P  D+   +   PHS+FT +G D+ +   +T
Sbjct:    5 DYYKILGVSRDATADEIKKSYRKLARKYHPD--VSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGSG----------WKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFES-----LFGGLGQEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVDYQTGQVTSKTRQLRIKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVT 228          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_TERTT (Chaperone protein dnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 57/156 (36.54%), Postives = 78/156 (50.00%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV R+ S  DLKKAY K+A K++PD+ PD+   AE K     EAYEVLSD QKRA +D +G      QG      + F  + D                   + FG  D+F         GGP +   +   L  +LE+  +GT+ KIK+
Sbjct:    5 DYYEVLGVARDVSEQDLKKAYRKVAMKFHPDRNPDD-ASAEEKFKEASEAYEVLSDKQKRAAYDQFGHAGVEGQGGMGGGAEGFGSFSDI----------------FGDVFG--DIFGGAGGGRGRGGPSRGADLRYTLDLSLEDAVRGTSVKIKV 141          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHS-FNRVFVVGGPK--KAPPIENRLPCTLEELYKGTTKKIKIYRKI 488
            D Y ILGV R A+ D++KKAY K++ KW+PD+ P+NK+EAE K   + +AYE+LSD QKRA +D +G    +  +A   FS                      ++ FG  DVF   F  V    G +  +   +  ++  +LEE   G  K+I+I  ++
Sbjct:    5 DLYAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFDAANQGAAGGGFS------------------GGNFSDIFG--DVFGDIFGNVRQTNGARQTRGHDLAYKIELSLEEAIHGVEKQIRIATQV 143          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 62/173 (35.84%), Postives = 87/173 (50.29%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG-MPQGSPRSADDIFSEY---FDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKK----------APPIENRLPCTLEELYKGTTKKIKIYRKI 488
            M  DYY++LGV R+A  D++KKAY K+A K++PDK PDN K+AE     V EAYEVLS+  KR  +D +G    GS  ++     +Y    DF+                       D+F +FN +F  GG                ++ RL  TLEE+ KG  K IKI +++
Sbjct:    1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGGGQYGGGADFS-----------------------DIFSAFNDMFGGGGGGSQRRRAASGIPGVDLKIRLKLTLEEIAKGVEKTIKIKKQV 149          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 66/185 (35.68%), Postives = 89/185 (48.11%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG--------MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKA-------PPIENRLPCTLEELYKGTTKKIKIYRKIV--DINGNTIK 515
            M  DYY+ILGV R+A  D++KKAY K+A K++PDK PDN KEAE K     EAYEVLS+  KR  +D +G           G P         Y D                  +   G +D+   F   F  GG ++A         ++ RL  TLEE+ KG  K +KI +++V  + NG   K
Sbjct:    1 MKRDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGGFGG--GGYADINDIFEMFTGGGRARGGGSPFSGFEDI---FGGGFSGGGGRRARSTGIHGTDLKIRLKLTLEEIAKGVEKTLKIKKQVVCSECNGTGSK 179          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_RALME4.624e-1756.58Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_CLOK54.624e-1736.48Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]
DNJA4_MOUSE6.039e-1727.15DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
CBPA_COXBU6.039e-1728.63Curved DNA-binding protein OS=Coxiella burnetii GN... [more]
CBPA_COXBR6.039e-1728.63Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
CBPA_COXBN6.039e-1728.63Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
DNAJ_TERTT7.887e-1736.54Chaperone protein dnaJ OS=Teredinibacter turnerae ... [more]
DNAJ_DICNV7.887e-1734.59Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_PELLD1.030e-1635.84Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_CHLP81.030e-1635.68Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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