CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM--------PQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGE--DDVFHSFNRVFVVG-----GPKKAPPIENRLPCTLEELYKGTTKKIKIYR 482
            DYY+ILGV RNA+ +++K+AY ++A +++PD  P N KEAE K   + EAYEVLSDP+KR ++D +G          QGS   +      + DF                   +FG+  +D+F  F+ +F         P+K   I   L  TL+E   G  K+I IYR
Sbjct:    6 DYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGN-KEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAAFDPKYGAQGSGGFSGGFGGGFADFDF----------------GSFGDIFEDLFEGFD-IFGTSRRRKEAPRKGADIYVDLELTLKESVFGCEKEIPIYR 156          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_LARHH (Chaperone protein dnaJ OS=Laribacter hongkongensis (strain HLHK9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGE--DDVFHSFNRVFVVGGPK---KAPPIENRLPCTLEELYKGTTKKIKI 476
            D+Y +LGV+R+AS DD+KKAY K+A K++PD+ PD+ K+AE K     EAYE+LSD QKRA +D YG     P++                             +AF +   D+F    R    GG     +   +   L  TLEE  +G  K+I+I
Sbjct:    5 DFYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDS-KDAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPQAG--------------FGGAGGQQGFGGFGDAFADIFGDIFGGGARAGGGGGRNAVYRGSDLRYNLEITLEEAARGCEKQIRI 146          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_CUPTR (Chaperone protein dnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K++PD+ PD+ K+AE K     EAYE+LSDP+K+A +D YG     P  A
Sbjct:    5 DYYEVLGVGKNASDDEIKKAYRKLAMKFHPDRNPDS-KDAEEKFKEAKEAYEMLSDPEKKAAYDQYGHAGVDPNMA 79          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHD (Chaperone protein dnaJ OS=Bacillus halodurans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 82/276 (29.71%), Postives = 116/276 (42.03%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPD--KYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ----------GSPRSADDIFSEYF-------DFTIPHXXXXXXXXXXXXXNEA-FGE--------DDVFHSFNRVFVVGG--PKKAP-----------------PIENRLPCTLEELYKGTTKKIKIYRKIVDING-NTIKVEEILTINVKPGWKKGTRITFEEKGNVQQNVKPA-DVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            DYY++LGVDRNAS D++KKAY K+A K++PD  K PD    AE K   V EA++ LSDPQK+A +D +G             G      DIF  +F       +   P               EA FG+        ++  H+ +      G  P+  P                  + NR  C   E   GT K IK   K     G   ++  + + + V  G   G +I    +G    N  PA D+  + + KPH  F RDG+D+     +T
Sbjct:    5 DYYEVLGVDRNASADEVKKAYRKLARKYHPDVNKAPD----AEDKFKEVKEAFDTLSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETTIEIPREETCHTCSGSGAKPGTKPESCPHCGGSGQLNIEQNTPFGRVVNRRVCHHCE---GTGKYIK--HKCATCGGKGKVRKRKKINVKVPAGIDHGQQIRLSGQGEAGVNGGPAGDLYIVFNVKPHEFFERDGDDIYCEMPLT 271          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJB3_MOUSE (DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGM--------PQGSPRSADDIFSEYFDFTIP 287
            DYY++LGV R AS + ++KAY K+A KW+PDK P++K+EAE +  +V +AYEVLSD +KR ++D  G           GSP    D F   F F  P
Sbjct:    3 DYYEVLGVPRQASAEAIRKAYRKLALKWHPDKNPEHKEEAERRFKQVAQAYEVLSDVRKREVYDRCGEVGEVGGGGAAGSP--FHDAFQYVFSFRDP 97          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEH (Chaperone protein dnaJ OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNK--KEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K++PD+ P+ K  K AE K   V EAYE+LSDP+K+A +D YG     P  A
Sbjct:    5 DYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMA 82          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP----QGSPRSADDIFSEYFDF 278
            DYY++L VDRNAS +++KKAY K+A K++PD+ PDN  EAE K   + EAY+VLSD +KRA++D YG      QG        F +  DF
Sbjct:    5 DYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDN-PEAEEKFKLINEAYQVLSDEEKRALYDQYGKAGLENQGFSGFNQKSFDDIMDF 93          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein dnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 221
            DYY++LGV +NAS D++KKAY K+A K++PD+ PDN K+AE     V EAYE+LSD QKRA +D YG
Sbjct:    5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDN-KDAEEHFKEVKEAYEMLSDSQKRAAYDQYG 70          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 81/295 (27.46%), Postives = 117/295 (39.66%), Query Frame = 3
Query:   24 YYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY-------GMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIV------------------DINGNTIKVE-----------------------EILTINVKPGWKKGTRITFE--------EKG--NVQQNVKP-----------ADVVFIVDEKPHSVFTRDGNDLIVTRTIT 701
            YY+ILGV +NAS DDLKKAY K A K +PDK  D +K  E     + +AYEVLSDP+KR ++D Y       GM  G      DIF  +F                      FG         +       ++   + + L  +LE+LY GT+KK+ + R ++                     G+ +KV                        E +    +    KG ++  E        EKG  N Q+   P            D+VF++ +K H  F R G+DL V  T++
Sbjct:   13 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKE-----LAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGHDPFDIFQSFF------------------GGSPFGGGGSSRGRRQ-------RRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLS 277          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 58/164 (35.37%), Postives = 82/164 (50.00%), Query Frame = 3
Query:   12 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ-GSPRSADDIFSEY----FDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKI 488
            M  DYY+ILGV R+A  D++KKAY K+A K++PDK PDNK +AE     V EAYEVLS+  KR  +D +G    GS  ++      Y     DF+                    G +D F    R        +   ++ RL  +LEE+ KG  K +KI +++
Sbjct:    1 MKKDYYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNK-DAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGAGAYGAGGADFSDIFSAFNDMFGGGGGGRGRGGFEDAFGGGQRRSRASAGIQGTDLKIRLKLSLEEIAKGVEKTLKIKKQV 163          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ANATD3.914e-1635.50Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_LARHH5.112e-1635.67Chaperone protein dnaJ OS=Laribacter hongkongensis... [more]
DNAJ_CUPTR5.112e-1652.63Chaperone protein dnaJ OS=Cupriavidus taiwanensis ... [more]
DNAJ_BACHD5.112e-1629.71Chaperone protein dnaJ OS=Bacillus halodurans GN=d... [more]
DNJB3_MOUSE6.677e-1645.36DnaJ homolog subfamily B member 3 OS=Mus musculus ... [more]
DNAJ_RALEH6.677e-1652.56Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_NITSB6.677e-1648.89Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_BURM16.677e-1659.70Chaperone protein dnaJ OS=Burkholderia multivorans... [more]
DNJH_CUCSA8.720e-1627.46DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNAJ_PROVI8.720e-1635.37Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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