CF417634

Overview
NameCF417634
Unique NameCF417634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BORA1 (Chaperone protein dnaJ OS=Bordetella avium (strain 197N) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA-------------DDIFSEYF 272
            DYY++LGV ++A+ D+LKKAY K+A K++PD+ P N KEAE K     EAYEVL D QKRA +D YG     P SA              DIF E F
Sbjct:    5 DYYEVLGVAKDAADDELKKAYRKLAMKYHPDRNPGN-KEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNSAGGAGMGGGFADAFGDIFGEIF 100          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--QGSPR------SADDIFSEYFD 275
            DYY++LGV + AS D++KKAY K+A K++PD+ PDN  EAE K     EAYEVLSD +KR+M+D  G    +G         SA+DIFS++ D
Sbjct:    5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNAFEGGGGGGFGGFSAEDIFSQFGD 96          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K++PD+ PD+ KE+E K   V EAYE+LSD +K+A +D YG     P  A
Sbjct:    5 DYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDS-KESEEKFKEVKEAYEMLSDAEKKAAYDQYGHAGVDPNMA 79          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 58/168 (34.52%), Postives = 80/168 (47.62%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA------------DDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKI 488
            DYY+ILGV RNAS +++KKAY ++  K++PD     K E E K   + EAY+VLSDP+KR ++D YG        A            ++I  E+FDF I                  F          R   V G     P+E     TLEE +KGTT  I++ R++
Sbjct:    8 DYYEILGVPRNASQEEIKKAYRRLVRKYHPDIC--KKPECEEKFKEINEAYQVLSDPEKRKLYDMYGHAAFEGAGAQQRVETTEIPPIEEILREFFDFDI---------------GSIFERATGRRRARRRRSVKGEDIVVPVE----ITLEEAFKGTTVPIEVEREV 154          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLWR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP------QGSPRSAD--DIFSEYF 272
            DYY +L V RNAS D++KKAY+K+A K++PD+ P N +EAE K   V  AYEVLSD +KRA +D YG        QG   + D  DIF+++F
Sbjct:    5 DYYDLLEVGRNASIDEIKKAYKKLALKYHPDRNPGN-QEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHEGASGGFQGFSSAGDFSDIFNDFF 95          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K++PD+ PDN K+AE       EAYE+LSD QKRA +D YG     P  A
Sbjct:    5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDN-KDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMA 79          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP-------------QGSPRSAD--DIFSEYF 272
            +DYY+ LGV RNAS  ++KKAY +MA K++PD+ P + KEAEA+     EAYE+LSDPQKRA +D +G                G P   D  DIFS+ F
Sbjct:    4 SDYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGD-KEAEARFKEAKEAYEILSDPQKRAAYDQFGHAGVDPSAGMGGAGGPGGPGGPDFADIFSDVF 102          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIEC (Chaperone protein dnaJ OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 56/161 (34.78%), Postives = 81/161 (50.31%), Query Frame = 3
Query:   18 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTY--------GMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            AD+Y+ LGV ++A   +LK A+ K+A K++PDK PD+ KEAE K   + EAYE+L DPQKRA +D Y        GM  G    A   FS+ F+                   + FGE  +     R    GG ++   +   +  TLEE + G T +I++
Sbjct:    4 ADFYETLGVAKSADEKELKSAFRKLAMKYHPDKNPDD-KEAERKFKEINEAYEMLKDPQKRAAYDRYGHAAFEHGGMGGGGGGFAGGGFSDIFE-------------------DIFGE-MMGGGRGRQRSAGGRERGADLRYNMEITLEEAFSGKTAQIRV 143          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_RALPJ (Chaperone protein dnaJ OS=Ralstonia pickettii (strain 12J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSA 248
            DYY++LGV +NAS D++KKAY K+A K++PD+ PD+ KEAE K     EAYE+LSD +K+A +D YG     P  A
Sbjct:    5 DYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDS-KEAEDKFKEAKEAYEMLSDAEKKAAYDQYGHAGVDPNMA 79          
BLAST of CF417634 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOVD (Chaperone protein dnaJ OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 57/155 (36.77%), Postives = 76/155 (49.03%), Query Frame = 3
Query:   21 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSF---NRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKI 476
            DYY++LGV+R A   +LKKAY ++A K++PD+ PD+ K AE K   V EAYEVLSD  KR  +D YG         D        F                 ++ FG  DVF  F    R    GGP++   +   L   LEE  +GTT  I++
Sbjct:    5 DYYEVLGVERGAGEAELKKAYRRLAMKYHPDRNPDD-KSAEEKFKEVNEAYEVLSDAGKRMAYDQYG-----HAGVDQSMGGGAGF----------GAGGANFSDIFG--DVFSDFFGAGRAGARGGPQRGSDLRYTLELNLEEAVRGTTVTIRV 141          
The following BLAST results are available for this feature:
BLAST of CF417634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BORA18.720e-1648.45Chaperone protein dnaJ OS=Bordetella avium (strain... [more]
DNAJ_ACIAD8.720e-1649.46Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_RALEJ1.139e-1552.63Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ2_AQUAE1.139e-1534.52Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DNAJ_WOLWR1.487e-1550.00Chaperone protein dnaJ OS=Wolbachia sp. subsp. Dro... [more]
DNAJ_BURVG1.487e-1553.95Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_ALHEH1.487e-1547.00Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DNAJ_RHIEC1.943e-1534.78Chaperone protein dnaJ OS=Rhizobium etli (strain C... [more]
DNAJ_RALPJ1.943e-1552.63Chaperone protein dnaJ OS=Ralstonia pickettii (str... [more]
DNAJ_AZOVD1.943e-1536.77Chaperone protein dnaJ OS=Azotobacter vinelandii (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-564 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417634 ID=CF417634; Name=CF417634; organism=Citrus sinensis; type=EST; length=703bp
AAGAAGAGAAGATGGGAGCTGATTATTACAAGATACTGGGAGTTGATCGG
AATGCAAGTTGCGATGACCTGAAGAAGGCTTACGAAAAGATGGCCGCGAA
GTGGAATCCTGATAAATATCCTGATAACAAGAAAGAAGCTGAAGCTAAGT
TGAACCGAGTTTGTGAAGCTTATGAGGTTCTAAGTGATCCTCAGAAAAGA
GCAATGTTTGATACTTACGGTATGCCACAAGGCAGTCCCCGAAGTGCTGA
TGACATTTTTTCGGAATATTTTGATTTCACAATCCCCCATGGAGGTGGAG
GGAGGAGAGGGTCAAGTTCCAGTTTCTCAAATGAGGCATTTGGTGAGGAT
GATGTTTTTCATTCCTTTAATAGAGTATTTGTAGTGGGTGGACCTAAGAA
AGCACCTCCGATTGAGAATAGGCTGCCTTGTACCCTTGAGGAACTCTACA
AGGGGACTACTAAGAAGATAAAGATCTATAGGAAAATTGTTGACATCAAT
GGTAATACAATCAAGGTGGAAGAAATTCTAACTATTAATGTGAAGCCTGG
ATGGAAGAAGGGTACAAGGATCACCTTCGAAGAGAAGGGAAATGTGCAGC
AAAATGTTAAACCTGCAGACGTCGTCTTCATCGTCGACGAGAAGCCTCAC
AGTGTGTTTACTCGAGATGGGAATGATTTGATCGTCACAAGGACGATAAC
TCT
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