CF417636

Overview
NameCF417636
Unique NameCF417636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFVIGGPHGD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC VQV+YAIGV  P+S+ ++++GTG+I D++I+++V+  FD RP  +   L+L R   G   KTAAYGHFGRD+P+FTWE
Sbjct:  228 INPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRWVAKNIVAAGLADRCEVQVAYAIGVARPVSMMIETFGTGRITDEKIVELVQRHFDLRPKAIIQELNLLRPIYG---KTAAYGHFGRDEPEFTWE 374          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_SACD2 (S-adenosylmethionine synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.020e-42
Identity = 87/152 (57.24%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +H+NP+G+F+IGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTG I D EI K+V + FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  224 YHINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRCEIQVSYAIGVAEPTSISVNTFGTGSIADSEISKLVAQHFDLRPRGIIEMLDLLR---PIYRKTAAYGHFGREEPEFTWE 372          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.020e-42
Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD GLTGRKII+D+Y             KDP+KVDRS AY+ R  AK++VA+G+  RC VQV+YAIGV EP+SV VD  GTGKIP K I +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  227 FLINPTGRFVIGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVASGVCERCEVQVAYAIGVAEPVSVMVDCNGTGKIPSKRISEIVREVFDMRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.332e-42
Identity = 86/152 (56.58%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +    +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  224 FLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA GLA +C++Q+SYAIGV +P SV V ++GTGKI D++I ++V E+FD RP  +   L+L R     + KTAAYGHFGR++P+FTWE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSTFGTGKISDEKIAQLVSENFDLRPKGIVKMLNLLR---PIYRKTAAYGHFGREEPEFTWE 374          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_NITSB (S-adenosylmethionine synthetase OS=Nitratiruptor sp. (strain SB155-2) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 84/152 (55.26%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +H+NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRSGAY  R  AK++VA+G   +  VQ++YAIGV EP+S+ VDS+GT K+PD+++   V++ FD  P  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  223 YHINPTGRFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSGAYAARYVAKNLVASGACEKATVQIAYAIGVVEPVSIMVDSHGTAKVPDEKLEACVRDLFDLTPRGIIKTLDLLR---PIYRKTAAYGHFGRELPEFTWE 371          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 85/150 (56.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFV+GGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLAR+C VQV+YAIGV +P+S+ V ++GTGKIPD ++ +++   FD RP  +   LDL R   G   KTAAYGHFGR++P FTWE
Sbjct:  227 INPTGRFVVGGPMGDCGLTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMVQTFGTGKIPDGKLAELIARHFDLRPRAIIHELDLLRPIYG---KTAAYGHFGREEPSFTWE 373          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 87/150 (58.00%), Postives = 108/150 (72.00%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P++V V + GTGKIPD +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  227 VNPTGRFVIGGPQGDCGLTGRKIIVDTYGGASPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVASGLARQCQVQVSYAIGVARPINVTVYTEGTGKIPDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_MAGSM (S-adenosylmethionine synthetase OS=Magnetococcus sp. (strain MC-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 85/152 (55.92%), Postives = 110/152 (72.37%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            + +NP+GRFVIGGP GDAG+TGRKII+DTY             KDP+KVDRS AY+ R  AK+IVA GLA +C +QV+YAIGV +P+SV VD++GTGK+ D+ I ++VK+ FD RP  +   LDL R     + K+AAYGHFGR+ P+FTWE
Sbjct:  227 YFINPTGRFVIGGPVGDAGVTGRKIIVDTYGGMGSHGGGAFSGKDPSKVDRSSAYMGRYVAKNIVAAGLAEKCEIQVAYAIGVSQPMSVMVDTFGTGKLDDEAITELVKKHFDLRPKAIVQQLDLLR---PIYKKSAAYGHFGRELPEFTWE 375          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  231 YYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
The following BLAST results are available for this feature:
BLAST of CF417636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_AZOSE7.811e-4357.33S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_SACD21.020e-4257.24S-adenosylmethionine synthetase OS=Saccharophagus ... [more]
METK_GEOSM1.020e-4258.55S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]
METK_COXBN1.332e-4256.58S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_POLSQ1.740e-4255.92S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_NITSB1.740e-4255.26S-adenosylmethionine synthetase OS=Nitratiruptor s... [more]
METK_NITEU1.740e-4256.67S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_RALEH2.273e-4258.00S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_MAGSM2.273e-4255.92S-adenosylmethionine synthetase OS=Magnetococcus s... [more]
METK_CLOPS2.273e-4255.92S-adenosylmethionine synthetase OS=Clostridium per... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-566 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417636 ID=CF417636; Name=CF417636; organism=Citrus sinensis; type=EST; length=677bp
TTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGA
TGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGG
GAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGAT
AGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAA
CGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGC
CTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCT
GACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGG
AATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCT
TGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACT
TGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTG
AGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTA
GTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGC
AAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCT
TTTTCTTCTTTCCCCACTTCTTTTTTG
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