CF417636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42 Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 1 Query: 4 HLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 ++NP+GRFVIGGP GD GLTGRKIIIDTY KDPTKVDRS AY R AK+IVA GLA +C ++++YAIG+ PLS+F+D++GTGK+ +++++++V + FD RPG + +LDL++ + K AAYGHFGR D D WE Sbjct: 235 YINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42 Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1 Query: 7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +NP+GRFVIGGP GD GLTGRKII+DTY KDP+KVDRS +Y R AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D I +V+E FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 228 INPTGRFVIGGPVGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42 Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1 Query: 7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +NP+GRFVIGGP GD GLTGRKII+DTY KDP+KVDRS +Y R AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D I +V+E FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 228 INPTGRFVIGGPVGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 84/152 (55.26%), Postives = 108/152 (71.05%), Query Frame = 1 Query: 1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 F +NP+GRFVIGGP GD GLTGRKII+DTY KDP+KVDRS AY R AK++VA GLA +C++Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP + L+L R + KTAAYGHFGR++P+F+WE Sbjct: 226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSAFGTGKIVDEKIAQLVSEHFDLRPKGIVKMLNLLR---PIYKKTAAYGHFGREEPEFSWE 374
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +NP+GRFV+GGP GD GLTGRKII+DTY KDPTKVDRS AY R AK+IVA GLAR+C +QV+YAIGV P+++ V + GTG IPD EI K+V FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 233 INPTGRFVVGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVAAHFDLRPKGIIQMLDLLR---PIYSKTAAYGHFGREEPEFTWE 379
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 85/150 (56.67%), Postives = 107/150 (71.33%), Query Frame = 1 Query: 7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +NP+GRFVIGGP GD GLTGRKII+DTY KDP+KVDRS AY R AK+IVA GLAR+C +QV+YAIGV +P+++ V + GTG IPD +I ++V+E FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 233 INPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAQPMNITVYTEGTGVIPDAKIAELVREFFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 379
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_MYXXD (S-adenosylmethionine synthetase OS=Myxococcus xanthus (strain DK 1622) GN=metK PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 474 F +NP+GRFV+GGP GD+GLTGRKII+DTY KDP+KVDRS AY+ R AK++VA GLARRC VQVSYAIGV EP+SV V+++GT +P++ I V+++F RP +T L+L R + KTAAYGHFGR + +FTWE V+ K Sbjct: 221 FFINPTGRFVVGGPMGDSGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRHIAKTVVAAGLARRCEVQVSYAIGVAEPVSVMVETFGTATVPEERIALAVRKTFGLRPREITEYLNLLR---PIYQKTAAYGHFGRTEKEFTWERVEEKK 375
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41 Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 F +NP+GRFVIGGP GD GLTGRKII+DTY KDP+KVDRS AY R AK+IVA GLA R +Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 225 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 373
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.513e-41 Identity = 86/150 (57.33%), Postives = 105/150 (70.00%), Query Frame = 1 Query: 7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +NP+GRFV+GGP GD GLTGRKII+D+Y KDP+KVDRS AY+ R AK++VA GL +C VQV+YAIGV EP+SV VD+ GTGKI K I +IV+E FD RP + LDL R + KTAAYGHFGR+ P+FTWE Sbjct: 229 INPTGRFVVGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTAGTGKISSKRIAEIVREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41 Identity = 83/152 (54.61%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456 +H+NP+G+F+IGGPHGD GLTGRKII+DTY KD TKVDRS AY+ R AK+IVA GLA RC VQ++YAIGV EP+SV VD+ GTGKI D ++ ++++E F PG + +L L+R F++T A GHFGRD FTWE Sbjct: 229 YHINPTGKFIIGGPHGDCGLTGRKIIVDTYGGWGRHGGGAFSGKDSTKVDRSAAYMARYVAKNIVAAGLAERCEVQLAYAIGVTEPVSVHVDTEGTGKIEDAKLCELIREHFPLTPGGIIDHLQLRR---PVFVETTAGGHFGRDGEGFTWE 377 The following BLAST results are available for this feature:
BLAST of CF417636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417636 ID=CF417636; Name=CF417636; organism=Citrus sinensis; type=EST; length=677bpback to top |