CF417636

Overview
NameCF417636
Unique NameCF417636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 1
Query:    4 HLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            ++NP+GRFVIGGP GD GLTGRKIIIDTY             KDPTKVDRS AY  R  AK+IVA GLA +C ++++YAIG+  PLS+F+D++GTGK+ +++++++V + FD RPG +  +LDL++     + K AAYGHFGR D D  WE
Sbjct:  235 YINPTGRFVIGGPQGDTGLTGRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS +Y  R  AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D  I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  228 INPTGRFVIGGPVGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS +Y  R  AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D  I  +V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  228 INPTGRFVIGGPVGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41
Identity = 84/152 (55.26%), Postives = 108/152 (71.05%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK++VA GLA +C++Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP  +   L+L R     + KTAAYGHFGR++P+F+WE
Sbjct:  226 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSAFGTGKIVDEKIAQLVSEHFDLRPKGIVKMLNLLR---PIYKKTAAYGHFGREEPEFSWE 374          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41
Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFV+GGP GD GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD EI K+V   FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  233 INPTGRFVVGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVAAHFDLRPKGIIQMLDLLR---PIYSKTAAYGHFGREEPEFTWE 379          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41
Identity = 85/150 (56.67%), Postives = 107/150 (71.33%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLAR+C +QV+YAIGV +P+++ V + GTG IPD +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  233 INPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAQPMNITVYTEGTGVIPDAKIAELVREFFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 379          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_MYXXD (S-adenosylmethionine synthetase OS=Myxococcus xanthus (strain DK 1622) GN=metK PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41
Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 474
            F +NP+GRFV+GGP GD+GLTGRKII+DTY             KDP+KVDRS AY+ R  AK++VA GLARRC VQVSYAIGV EP+SV V+++GT  +P++ I   V+++F  RP  +T  L+L R     + KTAAYGHFGR + +FTWE V+  K
Sbjct:  221 FFINPTGRFVVGGPMGDSGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRHIAKTVVAAGLARRCEVQVSYAIGVAEPVSVMVETFGTATVPEERIALAVRKTFGLRPREITEYLNLLR---PIYQKTAAYGHFGRTEKEFTWERVEEKK 375          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA R  +Q+SYAIGV +P SV V ++GTGKI D++I ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  225 FLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 373          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.513e-41
Identity = 86/150 (57.33%), Postives = 105/150 (70.00%), Query Frame = 1
Query:    7 LNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +NP+GRFV+GGP GD GLTGRKII+D+Y             KDP+KVDRS AY+ R  AK++VA GL  +C VQV+YAIGV EP+SV VD+ GTGKI  K I +IV+E FD RP  +   LDL R     + KTAAYGHFGR+ P+FTWE
Sbjct:  229 INPTGRFVVGGPMGDCGLTGRKIIVDSYGGHGAHGGGAFSGKDPSKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTAGTGKISSKRIAEIVREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CF417636 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 83/152 (54.61%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    1 FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 456
            +H+NP+G+F+IGGPHGD GLTGRKII+DTY             KD TKVDRS AY+ R  AK+IVA GLA RC VQ++YAIGV EP+SV VD+ GTGKI D ++ ++++E F   PG +  +L L+R     F++T A GHFGRD   FTWE
Sbjct:  229 YHINPTGKFIIGGPHGDCGLTGRKIIVDTYGGWGRHGGGAFSGKDSTKVDRSAAYMARYVAKNIVAAGLAERCEVQLAYAIGVTEPVSVHVDTEGTGKIEDAKLCELIREHFPLTPGGIIDHLQLRR---PVFVETTAGGHFGRDGEGFTWE 377          
The following BLAST results are available for this feature:
BLAST of CF417636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOD68.636e-4252.98S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_ACIF58.636e-4258.00S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIF28.636e-4258.00S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_POLNS1.128e-4155.26S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_DELAS1.128e-4157.33S-adenosylmethionine synthetase OS=Delftia acidovo... [more]
METK_VARPS1.473e-4156.67S-adenosylmethionine synthetase OS=Variovorax para... [more]
METK_MYXXD1.924e-4154.43S-adenosylmethionine synthetase OS=Myxococcus xant... [more]
METK_HERAR1.924e-4157.24S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_GEOMG2.513e-4157.33S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_RHOBA3.281e-4154.61S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-566 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417636 ID=CF417636; Name=CF417636; organism=Citrus sinensis; type=EST; length=677bp
TTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGA
TGCTGGTCTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGG
GAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGAT
AGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAA
CGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGC
CTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCT
GACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGG
AATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCT
TGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACT
TGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTG
AGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTA
GTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGC
AAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCT
TTTTCTTCTTTCCCCACTTCTTTTTTG
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