CF417650

Overview
NameCF417650
Unique NameCF417650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 8.576e-66
Identity = 120/224 (53.57%), Postives = 159/224 (70.98%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W LYI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_PIG (Catalase OS=Sus scrofa GN=CAT PE=1 SV=4)

HSP 1 Score: 247.669 bits (631), Expect = 4.256e-65
Identity = 119/224 (53.12%), Postives = 158/224 (70.54%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN+ G+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRFSKAKVFEHVGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNEKGEAVYCKFHYKTDQGIKNL-SVEDAARLPQEDPDYGIRDLFNAIATGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 247.284 bits (630), Expect = 5.559e-65
Identity = 119/224 (53.12%), Postives = 159/224 (70.98%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   ++ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   EEA ++   +  +  +DL+++IA+GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-PVEEAGRLAQEDPDYGLRDLFNAIASGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 120/224 (53.57%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGNWDL GN+ P FFIRD +  P  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  YRHM G+G  TF LVN  G+  Y KFH+K   G+K  I  EEA ++  ++  ++ +DLY++IA GN+P W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGYRHMNGYGSHTFKLVNAQGQPVYCKFHYKTNQGIK-NIPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 245.743 bits (626), Expect = 1.617e-64
Identity = 119/224 (53.12%), Postives = 157/224 (70.09%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN  G+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAAGEAVYCKFHYKTDQGIKNL-SVEDAARLSHEDPDYGLRDLFNAIATGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 245.358 bits (625), Expect = 2.112e-64
Identity = 118/224 (52.68%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H++    + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKHPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGLRDLFNAIATGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_HUMAN (Catalase OS=Homo sapiens GN=CAT PE=1 SV=3)

HSP 1 Score: 244.588 bits (623), Expect = 3.603e-64
Identity = 118/224 (52.68%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD I FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA G YP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 117/225 (52.00%), Postives = 152/225 (67.56%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLAHF RER+PERVVHARGA A G F     +   T A+  +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L   E+A ++     +HA++DLY++I  G+YPEW LY+
Sbjct:   38 IEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTIANFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLSPEATTMIMYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNL-STEQAAQIQAKEFNHASRDLYEAIENGDYPEWDLYV 261          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64
Identity = 119/224 (53.12%), Postives = 157/224 (70.09%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDAI FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN +G+  Y KFH+K   G+K L    EA ++   +  +  +DL+++IA GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNADGEAVYCKFHYKTDQGIKNL-PVGEAGRLAQEDPDYGLRDLFNAIANGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64
Identity = 117/225 (52.00%), Postives = 152/225 (67.56%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +  ++ F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L  D +A ++     +HA++DLY++I  G+YPEW LY+
Sbjct:   38 IEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTKAQFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMITYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNLSTD-QAAQIQAKEFNHASRDLYEAIENGDYPEWDLYV 261          
The following BLAST results are available for this feature:
BLAST of CF417650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_BOVIN8.576e-6653.57Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA_PIG4.256e-6553.13Catalase OS=Sus scrofa GN=CAT PE=1 SV=4[more]
CATA_RAT5.559e-6553.13Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_DANRE1.238e-6453.57Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_CANFA1.617e-6453.13Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_CALJA2.112e-6452.68Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_HUMAN3.603e-6452.68Catalase OS=Homo sapiens GN=CAT PE=1 SV=3[more]
CATA_LISIN6.146e-6452.00Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_MOUSE8.027e-6453.13Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_LISSE8.027e-6452.00Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-580 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417650 ID=CF417650; Name=CF417650; organism=Citrus sinensis; type=EST; length=677bp
GGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACGTGTCG
TCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCCATGAT
ATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTTCAGAC
ACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAGCCCTG
AGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCAGAGAG
GGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATCCGTGA
TGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCCAAAGT
CTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCACCTTCCT
GAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACA
AGATTACAGGCACATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCA
ATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTGGAAACCAACTTGT
GGAGTTAAGTGTTTGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATC
TAATCACAGCCACGCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAA
ACTATCCTGAGTGGAAACTCTACATTC
back to top