CF417650

Overview
NameCF417650
Unique NameCF417650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64
Identity = 121/230 (52.61%), Postives = 158/230 (68.70%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECT-----HDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKL+HF RERIPERVVHARG  A G F  T       +S  T A LF+  G +TPV VRFSTV H   SPETLRDPRGFAVKFYT +GNWDL+GN++ +FFIRDA+KFPD+IH+ KP+P ++IQ   RI DF +  PE+    +  +   GIP  YR M+G GV T+  VN  G+   VK+HW+P  GV+ L    +A +V  +N +HATQDL+D+I  G++P+W L++
Sbjct:   64 IEKLSHFDRERIPERVVHARGVGAHGVFRATGKVGDEPVSKYTRAKLFQEDGKETPVFVRFSTVGHGTHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKIFFIRDALKFPDLIHSQKPSPTTNIQSQERIFDFFAGSPEATHMITLLYSPWGIPASYRFMQGSGVNTYKWVNDQGEGVLVKYHWEPVQGVRNL-TQMQADEVQATNFNHATQDLHDAIERGDFPQWDLFV 292          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.369e-63
Identity = 117/225 (52.00%), Postives = 151/225 (67.11%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F D G P  YR + G  V  F  +N+ GK  YVK  W P  G+  L   E+A ++     +HA++DLY++I  G+YPEW LY+
Sbjct:   38 IEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYLFSDEGTPASYREVRGSSVHAFKWINEEGKTVYVKLRWVPKAGIVNL-STEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYV 261          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 241.506 bits (615), Expect = 3.050e-63
Identity = 119/225 (52.89%), Postives = 154/225 (68.44%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLAHF RER+PERVVHA+GA A G+FE T+D++  T A      G +TP+ +RFSTV  E GS +T+RDPRGFAVKFYT EGN+D++GN+ PVFFIRDAIKFPD IH  K +PK+H++    + DF S  PESL   +    D GIP   RHM GFG  TF   N  G+  ++K+H+K   GVK L D   A K+ G N  + T+DL+++I  G+YP WKLY+
Sbjct:   37 LEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESLHQVTILMSDRGIPATLRHMHGFGSHTFKWTNAEGEGVWIKYHFKTEQGVKNL-DVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYV 260          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 241.121 bits (614), Expect = 3.984e-63
Identity = 118/224 (52.68%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A  +FE THDI+    A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT EG WDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN +G+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W LYI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFAYFEVTHDITKYCKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEEGIWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMMWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNGSGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGLRDLFNAIATGNYPSWTLYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 5.203e-63
Identity = 116/224 (51.79%), Postives = 155/224 (69.20%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA   YP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLSQEDPDYGIRDLFNAIATEKYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 8.874e-63
Identity = 119/225 (52.89%), Postives = 153/225 (68.00%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            ++++AHF RERIPERVVHA+G  A GFFE T DI+    AD+F   G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP +H+++   + DF S  PE+       F D GIP  +RHM+GFG  TF LVNK+G   Y KFH K   G++ L  D  A+K+ G +  ++ +DLYDSI  GNYP W+L I
Sbjct:   57 LDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPETTHQVMILFGDRGIPDGFRHMDGFGSHTFKLVNKDGNAVYCKFHIKTAQGIRNLPPD-VAIKLAGEDPDYSIRDLYDSIENGNYPVWRLMI 280          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.514e-62
Identity = 116/224 (51.79%), Postives = 154/224 (68.75%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL GN+ P+FF+RDA+ FP  IH+ K NP++H+++   + DF +  PESL   S+ F D GIP  +RHM G+G  TF LVN   +  Y KFH+K   G++ L   EEA ++   +  +   DLY++IA GNYP W  YI
Sbjct:   59 DEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDPDMVWDFWALRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNAKDEPIYCKFHFKTDQGIRNL-TVEEANRLSAEDPDYGIHDLYEAIANGNYPSWTFYI 281          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.404e-62
Identity = 118/231 (51.08%), Postives = 153/231 (66.23%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNP-------KSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGNWDL+GN+IPVFFI+DAIKFPDVIH+ KP P       +S    +W   DF S  PES+    W   D  IP+ +R MEGFGV TF  VN   +  +VKFHWKP  G++ ++ + EAVK+ G++     +D++ +I +GN+PEW L++
Sbjct:   72 EKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEPDREFPQAQSAHDNFW---DFISLTPESMHMIMWVMSDRAIPRSFRFMEGFGVHTFRFVNAKDESTFVKFHWKPKLGLQSVVWN-EAVKINGADPDFHRRDMWQAIQSGNFPEWDLHV 298          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.752e-62
Identity = 115/225 (51.11%), Postives = 156/225 (69.33%), Query Frame = 2
Query:    2 VEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYI 676
            +EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGNWD++GN+ PVFFIRD +KFPD IH  K  P+S+++    + DF SH PE+L   +  F D GIP  YRHM GFG  T++L+N  G+ H+VK+H+K   G+K L    +A ++ G++  +A +DL+ +I  G++P+W++ I
Sbjct:   38 IEKLAHFNRENIPERRVHAKGSGAYGTFTVTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLA-PADAARLAGTDPDYAQRDLFGAIERGDFPKWRVCI 261          
BLAST of CF417650 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.186e-61
Identity = 117/229 (51.09%), Postives = 151/229 (65.94%), Query Frame = 2
Query:    5 EKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKL 670
            EK+ HF  ERIPER+VHARG +A G F+    +   T A   + P V+TPV VRFSTV   +GS ET+RD RGFA KFYT EGN+DL+GN+IPVFFI+DAIKFPD++HA KP P + I +       +W   DF ++  ES     W   D  IP+ +R MEGFGV TF  VN+ GK H+VKFHWKP  G+  L+ D EA K+ G +     +DL++SI  G+YPE++L
Sbjct:   59 EKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFW---DFIANNQESAHMVMWAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWD-EAQKIAGKDPDFHRRDLWESIENGDYPEYEL 283          
The following BLAST results are available for this feature:
BLAST of CF417650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_DEIRA8.027e-6452.61Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA_LISMO1.369e-6352.00Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_BACSU3.050e-6352.89Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_CAVPO3.984e-6352.68Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATA_PONAB5.203e-6351.79Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_ASCSU8.874e-6352.89Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_RANRU1.514e-6251.79Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATE_RHIME4.404e-6251.08Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_ONCVE5.752e-6251.11Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATE_BACPF2.186e-6151.09Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-580 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417650 ID=CF417650; Name=CF417650; organism=Citrus sinensis; type=EST; length=677bp
GGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACGTGTCG
TCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCCATGAT
ATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTTCAGAC
ACCTGTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAGCCCTG
AGACACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCAGAGAG
GGTAATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATCCGTGA
TGCAATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCCAAAGT
CTCACATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCACCTTCCT
GAAAGCTTGTCCACATTTTCCTGGTTCTTTGATGATGTGGGTATTCCACA
AGATTACAGGCACATGGAAGGCTTCGGTGTTCAAACTTTTACACTGGTCA
ATAAGAATGGGAAAGTGCACTATGTGAAATTCCACTGGAAACCAACTTGT
GGAGTTAAGTGTTTGATAGATGATGAAGAAGCAGTAAAGGTTGGTGGATC
TAATCACAGCCACGCTACTCAGGATCTCTACGACTCAATTGCAGCTGGAA
ACTATCCTGAGTGGAAACTCTACATTC
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