CF417697

Overview
NameCF417697
Unique NameCF417697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417697 vs. ExPASy Swiss-Prot
Match: PSAF_GLOVI (Photosystem I reaction center subunit III OS=Gloeobacter violaceus GN=psaF PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 2 
Query:  428 TKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWP 694
            TK++F+ Y      CG DG PHLI SG     G+F+ P +LFL+IAG +GW GR YL     E K    EIIID+P A + +  G  WP
Sbjct:   75 TKQKFERYDT--AYCGQDGYPHLITSGQLDRAGDFLIPSVLFLWIAGALGWAGRLYL----AESKGPEDEIIIDLPKAIKCLLLGLIWP 157
The following BLAST results are available for this feature:
BLAST of CF417697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PSAF_GLOVI2.112e-1446.07Photosystem I reaction center subunit III OS=Gloeo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-627 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417697 ID=CF417697; Name=CF417697; organism=Citrus sinensis; type=EST; length=696bp
ACACACACACACACACACACTCACCCTGAAAGAAAAGAAGAAAAGGAAAA
AGAAGATGTCTCTGACAATTCCAACAAATCTTTCAAAACCCCTATTGAAG
CCAAGATCAAACTCTCAGTTGAGCCATGCAAAATTATCGAAACAAATGAT
CACGTGCTCTTCTTCCGCTGGTTCTGAAGAGACTTCCTCTTCTTCTGGCA
AGGCCGCCAAGCCGCTCCAGGCTTTCTCAGCAGCCCTTGCACTTTCCTCA
ATTCTGCTATCAGCCCCACAGCTCGCAGTTGCCGACATCAGCGGCCTCAC
CCCATGCAAAGAGTCCAAACAATTCGCCAAGCGCGAGAAGCAGCAGCTCA
AGAAGCTCGAGTCTTCACTAAAACTGTACGCTCCCGACAGCGCCCCGGCT
CTCGCAATCAAAGCCACCATGGAGAAGACGAAACGGCGGTTTGACAACTA
CGGGAAGTACGGGTTGCTGTGCGGGTCAGATGGGTTGCCGCATCTGATTG
TGAGCGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCGGGGTTGTTG
TTTTTGTACATAGCTGGATGGATCGGGTGGGTTGGCAGGAGCTACTTGAT
CGCCATTAGCGGTGAAAAGAAGCCGGCCATGAAGGAGATCATCATTGATG
TTCCTTTGGCTTCCAGGTTGGTCTTCAGAGGTTTTAGCTGGCCTGT
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