CF417703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417703 vs. ExPASy Swiss-Prot
Match: H2BWT_HUMAN (Histone H2B type W-T OS=Homo sapiens GN=H2BFWT PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 40/86 (46.51%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 171 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 428 +++ Y +VLKQVH + +S +A+ +M+S ++DI +++A E+ RLAR K+ TIT+ E + AVRL+LPG++ K A SEGTKAV + Sbjct: 79 DSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGRLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
BLAST of CF417703 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.507e-16 Identity = 39/86 (45.35%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 171 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 428 +++ Y +VLKQVH + +S +A+ +M+S I+DI +++A E+ +LA Y K+ TITSR+IQ AVRL+LPG++ K A ++GT A + Sbjct: 161 DSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246
BLAST of CF417703 vs. ExPASy Swiss-Prot
Match: H2BV_BOVIN (Histone H2B subacrosomal variant OS=Bos taurus GN=SUBH2BV PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15 Identity = 40/91 (43.96%), Postives = 64/91 (70.33%), Query Frame = 3 Query: 168 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 440 + Y +YI +VLK+V P GISS+ + I+N+ IND+FE+++ E+ L Y K+ T+T +I+ AV L+LP +LAK+AV+ G +AV ++ S Sbjct: 32 LRNYSLYINRVLKEVVPQKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLLLPEKLAKYAVAFGKEAVQRYVRS 122
BLAST of CF417703 vs. ExPASy Swiss-Prot
Match: H2BV_MOUSE (Histone H2B subacrosomal variant OS=Mus musculus GN=Subh2bv PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.230e-14 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 177 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 440 Y +YI +VLK+V P+ GISS ++ IMN INDIFE++A E+ + K+ T+T +IQ AV L+LP +LA AV+ G+KAV +F S Sbjct: 36 YSLYINRVLKEVVPNRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLLLPKKLATLAVTFGSKAVHRFIHS 123
BLAST of CF417703 vs. ExPASy Swiss-Prot
Match: H2BV1_DICDI (Histone H2B.v1 OS=Dictyostelium discoideum GN=H2Bv1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 183 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 440 IYI K++KQ++P I K++ I+ S I D + E+ L + + K T+++R++QT+VRL GE+++HAVSEG K VT F S+ Sbjct: 18 IYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA 103 The following BLAST results are available for this feature:
BLAST of CF417703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417703 ID=CF417703; Name=CF417703; organism=Citrus sinensis; type=EST; length=573bpback to top |