CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 61/141 (43.26%), Postives = 78/141 (55.32%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAEL--------SRRG---YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD 478
            +G   +EL+    P+T  NF  L        S  G   ++    FHRIIK F++Q             SIYG  FEDE     KH   G+LSMANAGPNTNGSQFFIT  P  HLDGKH +FG+V +G+ V + L +V+ +
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVN 168          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 2
Query:   62 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFIT------------LAPAS----------------HLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            G  +V + T+ G  T +L+   +P+T  NF   ++ GYY+   FHR+I DF++Q            SIYG  FEDE      +   G LSMAN+GPNTNGSQFFI             LA                    LD KHT+FG++  G   ++ + + +    D+P+HDV I    V++
Sbjct:   14 GEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNL-YGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE 197          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 62/147 (42.18%), Postives = 80/147 (54.42%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL-------SRRG---YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSV--QTDKDDRPI 496
            G   +ELY   +P+T  NF  L        R G   ++  S FHR+I +F+ Q             SIYG  FEDE   E KHTG GILSMANAG NTNGSQFFI       LDGKH +FG+V  G++V+K +  +   + K  +P+
Sbjct:   19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPV 164          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPID_MOUSE1.429e-2143.2640 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPI1_STAAW1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAM1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB1.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA81.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA31.429e-2133.51Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CP19B_ARATH1.429e-2142.18Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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