CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32
Identity = 67/171 (39.18%), Postives = 102/171 (59.65%), Query Frame = 2
Query:   23 VLKATIKMLASDDGPPE---VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            V K   +++  +  P +   V  +T+ G   +EL+   +PR C NF  L  RGYYN   FHR I++F++Q            SI+G  F+DE   +L H+G G++SMAN+GP+TNGSQFF+    A+HL+ KHT+FG V  G+  +  + +V  D+ DRP+ ++KI+  SV
Sbjct:  326 VTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEEIKIIEASV 496          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 2
Query:   80 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            + T+ G  +++LY + +P+  +NF   +  GYY+N+ FHRIIK+F++Q            SI+   FEDEI P LKH     +SMAN+GPNTNGSQFFIT      LDGKHTIF R   G++V+ R+   +TDK DRP+   KI+  S+
Sbjct:  459 IHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKIINISI 607          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.524e-31
Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 2
Query:   80 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVK 529
            + T+ G   + L+   +P+   NF   ++ GYY+N  FHR+IK F++Q            SI+G  FEDE   E +H     +SMANAGPNTNGSQFFIT+AP + LD KH++FGRV  GM+V+  + S + DK ++P+ D+KI+   ++
Sbjct:  481 IRTTSGDIHMRLFPDAAPKAVENFTTHAKNGYYDNLIFHRVIKGFMIQTGCPFGDGTGGESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIESAKVDKTNKPLDDIKIINIDIR 630          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30
Identity = 68/147 (46.26%), Postives = 88/147 (59.86%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQ-TDKDDRPIHDVKI 511
            VTL T +G   +EL+ + +P+TC NF  L    YYN   FHR IK F+VQ            SI+G  FEDE    LKH+  G++SMAN GPNTNGSQFFIT     HLD K+T+FG+V  G+E +  L  +   +K  RP++DV I
Sbjct:    3 VTLHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKGGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHI 149          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.401e-30
Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQ-TDKDDRPIHDVKI 511
            VTL T +G   +E++ + +P+TC NF  L    YYN   FHR IK F+VQ            SI+G  FEDE    LKH   G++SMAN GPNTNGSQFFIT     HLD K+T+FG+V  G+E +  L  +   +K  RP++DV I
Sbjct:    3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHI 149          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30
Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQ-TDKDDRPIHDVKI 511
            VTL T +G   +E++ + +P+TC NF  L    YYN   FHR IK F+VQ            SI+G  FEDE    LKH   G++SMAN GPNTNGSQFFIT     HLD K+T+FG+V  G+E +  L  +   +K  RP++DV I
Sbjct:    3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHI 149          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30
Identity = 69/158 (43.67%), Postives = 92/158 (58.23%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-----SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVC--RGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            VTL TS G   VE+Y +  P+T  NF  L   GYY+ S FHR+I  F+ Q                 SI+G  FEDEI+P L+H   G+LSMAN GP TNGSQFFIT   A HLDG +T+FGRV    G+  + ++ +V+ D+ +RP   V+I   ++
Sbjct:    3 VTLHTSHGDIKVEIYCESVPKTAENFLALCGSGYYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAVEVDRKNRPKEPVRIENVTI 160          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRG-MEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            +V L+TS G   +EL+ K +P+ CRNF +L   GYY+ + FHR++ +FIVQ            SIYG  F+DE    L+    G+++MANAGP+ NGSQFF TL  A  L+ KHTIFG+V    +  + RL  V  D D+RP++  KI  T V
Sbjct:   14 KVLLKTSAGDIDIELWSKETPKACRNFVQLCMEGYYDGTIFHRMVPEFIVQGGDPTGTGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLADVACDGDERPLNPHKIRSTEV 166          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXX-----SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVC--RGMEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            VTL T++G   +E++ +  P+T  NF  L   GYYN S FHR+I  F+VQ                 SIYG  FEDEI+P L+H   GI+SMAN GPNTNGSQFFI    A HLDG +T+FG++     ++ + +L  ++ DK +R   +V+I R +V
Sbjct:    3 VTLHTTLGDLKIEIFCESVPKTAENFLALCASGYYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLIGDESLQTLAKLEGLEVDKKNRIKEEVRIERVTV 160          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 64/142 (45.07%), Postives = 85/142 (59.86%), Query Frame = 2
Query:   86 TSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            T+ G   +EL+  ++P    NF +L+++GYY N+ FHR I  F++Q            SI+G  F+DE    LKH   GI+SMAN G NTNGSQFFI   PA HLD KHTIFGRV  G+ V+  L  V T+ +D P   +K+
Sbjct:  282 TNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKL 423          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIL2_ARATH3.070e-3239.18Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
CYP9_SCHPO4.009e-3244.97Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
CYP15_RHIOR1.524e-3142.00Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL3_CHICK1.684e-3046.26Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_RAT6.401e-3045.58Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN8.360e-3045.58Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL3_GIBZE8.360e-3043.67Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
SDC10_DANRE1.426e-2943.79Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
PPIL3_NEUCR2.432e-2943.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL2_SCHPO2.432e-2945.07Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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