CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGS 466
            +G  T +LY    P+T  NF  L    +G+ Y  S FHR+I  F++Q             SIYG  F DE   + +H   G+LSMANAGPNTNGSQFFIT  P   LDGKH +FG V  G++++K++ S
Sbjct:   15 LGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVK-RHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIES 142          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAEL--SRRG---------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 493
            +G   +EL+    P+T  NF  L    +G         ++    FHRIIK F++Q             SIYG  FEDE     KH   G+LSMANAG NTNGSQFFIT  P  HLDGKH +FG+V +G+ V + L +V+  K ++P
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEV-KGEKP 172          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20
Identity = 59/129 (45.74%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGS 466
            +G   +EL     P+T  NF  L    +G+ Y  S FHR+I  F+ Q             SIYG  F DE    LKH G G+LSMANAGPNTNGSQFFI       LDGKH +FG V  GM+V+K++ S
Sbjct:   58 LGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIES 185          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20
Identity = 60/130 (46.15%), Postives = 72/130 (55.38%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAELSRRGY---YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRL 460
            E S+G   ++L     P+T +NF  L  R     Y  S FHRII  F+VQ             SIYG  F DE   ELKHT  GILSMAN G +TNGSQFFITL     LD KH +FG V  GM+V+ ++
Sbjct:   17 EESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDE-NFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKI 145          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20
Identity = 57/162 (35.19%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   77 TLETSMGSFTVELYYKHSPRTCRNFAELSRRG---------------YYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRV--CRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            TL T+ G   + L+  H+P+T  NF  L++                 +Y+ + FHR+I+ F++Q               G+ F DE  PEL+     +L+MANAGP TNGSQFFIT+    HL+ +HTIFG V       V++ +    TD +DRP   V I
Sbjct:   18 TLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20
Identity = 57/162 (35.19%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   77 TLETSMGSFTVELYYKHSPRTCRNFAELSRRG---------------YYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRV--CRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            TL T+ G   + L+  H+P+T  NF  L++                 +Y+ + FHR+I+ F++Q               G+ F DE  PEL+     +L+MANAGP TNGSQFFIT+    HL+ +HTIFG V       V++ +    TD +DRP   V I
Sbjct:   18 TLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  131 PRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            P T  NF  L    +G+ +  S FHRII  F+ Q             SIYG  F+DE    LKHTG G+LSMAN+GPNTNGSQFF+T      LDGKH +FG V  G++V++++   Q  KD +P   V I
Sbjct:  166 PMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI-EAQGSKDGKPKQKVMI 294          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 61/150 (40.67%), Postives = 77/150 (51.33%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL--SRRG--------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            G     LY    P+T  NF  L    +G        +Y  S FHR+IK F+ Q             SIYG  FEDE  P + H+   +LSMANAGPNTNGSQFFIT++   HLDGKH +FG V +G  V++ + +      D P   V I
Sbjct:   19 GRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFP-VHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVI 167          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 61/143 (42.66%), Postives = 76/143 (53.15%), Query Frame = 2
Query:   83 ETSMGSFTVELYYKHSPRTCRNFAEL--SRRG--------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTD 478
            + + G   +ELY    P T  NF  L    RG        +Y  S FHR+I  F+ Q             SIYG  F+DE   + KHTG GILSM NAG NTNGSQFFI     S LDGKH +FG+V  GM+V++ +  V +D
Sbjct:   14 DKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVK-KHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSD 155          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CWC27_GIBZE (Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae GN=CWC27 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 62/179 (34.64%), Postives = 91/179 (50.84%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIY-------------------------GHVFEDEIKPELKHTGAGILSMAN-AGPNTNGSQFFITLAPASHLDGKHTIFGRVCRG-MEVIKRLGSVQTDK-DDRPIHDVKILRTSV 526
            V + T+ G  +VEL+ K +P TCRNF +L+  GYY+N+ FHR++  FI+Q            SIY                         G  F+DE    LK    G+L  AN + P+TN SQFF TL  A  L+GK+T+FGR+    +  + ++G  + D+  +RP + VKI R  +
Sbjct:   15 VIIHTTRGELSVELFAKQAPLTCRNFLQLALDGYYDNTIFHRLVPGFILQGGDPTGTGNGGESIYDGGAFSGDLDPWPMDQRMGKNAGPTGINFKDEFHSRLKFNRRGLLGSANESRPDTNSSQFFFTLDTAEELNGKNTMFGRIAGDTVYNLAKMGEGEVDEATERPTYPVKIERIEI 193          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIA_CANAL1.580e-2044.19Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_HUMAN2.064e-2041.7840 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIF_RAT2.696e-2045.74Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYPH_ENCCU2.696e-2046.15Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPIA_MYCTU3.520e-2035.19Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO3.520e-2035.19Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIE_MOUSE4.598e-2045.04Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPID_AMAMU4.598e-2040.67Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
CYPH_BRANA4.598e-2042.66Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CWC27_GIBZE4.598e-2034.64Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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