CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 493
            +G   +EL+    P+T  NF +     +        Y  S FHR+IKDF++Q             SIY   F DE   +L+H+  G+LSMAN+GP+TNG QFFIT +    LDGKH +FG++  G+ V++++ +V T  +++P
Sbjct:   24 VGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRP 493
            +G   +EL+    P+T  NF +     +        Y  S FHR+IKDF++Q             SIY   F DE   +L+H+  G+LSMAN+GP+TNG QFFIT +    LDGKH +FG++  G+ V++++ +V T  +++P
Sbjct:   24 VGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 57/130 (43.85%), Postives = 74/130 (56.92%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSV 469
            +G    +LY    P+T  NF  L    +G+ Y  S FHR+I DF++Q             SIYG  F DE   +  H   G+LSMANAGPNTNGSQFFIT  P   LDGKH +FG V  G +++K++ S+
Sbjct:   15 IGRVVFKLYNDIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDE-NFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESL 143          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 60/136 (44.12%), Postives = 75/136 (55.15%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL--SRRG--------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSV 469
            G   +EL+   +P+T  NF  L    +G        +Y  S FHR+I  F+ Q             SIYG  F DE   + KHTG GILSMANAGP TNGSQFFI  A    L+GKH +FG+V  GM+VIK+  +V
Sbjct:   18 GRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVK-KHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAV 152          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 59/133 (44.36%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL--SRRG--------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRL 460
            G  T +L+    P+T  NF  L    +G        +Y NS FHRII  F+ Q             SIYG  F+DE    LKH G G+LSMANAGPNTNGSQFFIT      LDG HT+FG++  G +V+  L
Sbjct:   21 GRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDE-NFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLL 152          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  131 PRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            P T  NF  L    +G+ +  S FHRII  F+ Q             SIYG  F+DE    LKHTG G+LSMAN+GPNTNGSQFF+T      LDGKH +FG V  G++V++++   Q  KD +P   V I
Sbjct:  166 PMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI-EAQGSKDGKPKQKVII 294          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 59/138 (42.75%), Postives = 72/138 (52.17%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL--SRRG--------YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQT 475
            G   +ELY    P+T  NF  L    +G        +Y  S FHR+I +F+ Q             SIYG  F DE K   K    G+LSMANAGPNTNGSQFFI       LDGKH +FG+V  GM+V+K +  V T
Sbjct:   18 GRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDE-KFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGT 154          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   77 TLETSMGSFTVELYYKHSPRTCRNFAELSRRG---------------YYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVC--RGMEVIKRLGSVQTDKDDRPIHDVKI 511
            TL T+ G   V L+  H P+T  NF  L++                 +Y+ + FHR+I+ F++Q               G+ F DE  PEL+     +L+MANAGP TNGSQFFIT+    HL+ +HTIFG V      +V+  + +  TD +DRP   V I
Sbjct:   18 TLHTNRGDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRPTEPVVI 176          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 64/149 (42.95%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   95 GSFTVELYYKHSPRTCRNFAEL-------SRRG---YYNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDE--IKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSV--QTDKDDRPI 496
            G   +ELY   +PRT  NF  L        R G   +Y  S FHR+I +F+ Q             SIYG  F DE  IK   +HTG GILSMANAG  TNGSQFFI       LDGKH +FG+V  GM V++ +  V   + K  RP+
Sbjct:   18 GRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIK---RHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPV 163          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 60/129 (46.51%), Postives = 70/129 (54.26%), Query Frame = 2
Query:   86 TSMGSFTVELYYKHSPRTCRNFAEL--SRRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRL 460
            T  G   +EL     P+T  NF  L     G+ Y  S FHRII  F+ Q             SIYG  FEDE    LKHTG G LSMANAG NTNGSQFFI     + LDGKH +FG+V  GM V++ +
Sbjct:  166 TLAGRIEIELRGDVVPKTAENFRALCTGEAGFGYKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDE-NFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREM 293          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
PPIH_HUMAN6.005e-2037.06Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN6.005e-2037.06Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
CYPH_YEAST6.005e-2043.85Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYPH_SOLLC6.005e-2044.12Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYP6_RHIOR6.005e-2044.36Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIE_HUMAN7.843e-2045.04Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
CYPH_MAIZE7.843e-2042.75Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
PPIA_MYCLE1.024e-1935.80Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYPH_LUPLU1.024e-1942.95Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
PPIE_RHIOR1.338e-1946.51Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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