CF417736

Overview
NameCF417736
Unique NameCF417736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CWC27_ASPFU (Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fumigatus GN=cwc27 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 59/176 (33.52%), Postives = 86/176 (48.86%), Query Frame = 2
Query:   65 PP--EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGH----------------VFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPAS-HLDGKHTIFGRVCRG---MEVIKRLGSVQTDKDDRPIHDVKILRTSV 526
            PP    TL T+ G   + L+   +P TC+NF +     YY  + FHRI+ DFIVQ            SIY +                V  DE+   L+    G++ MA +   T GSQFFITLA A   L+G+ T+FGRV  G     V+K   + + ++ +RP++ VK++   V
Sbjct:   10 PPTASATLHTTFGPIHIALFANQTPLTCKNFLQHCLDNYYAGTIFHRIVPDFIVQGGDPTGTGSGGTSIYEYPEFEYDPEARDPNEKVVLRDELHSRLRFNRRGLVGMAKSEDGTYGSQFFITLANAERELNGQCTLFGRV-EGDSIYNVLKIAEAERVERTERPVYPVKVVSCEV 184          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 50/114 (43.86%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  131 PRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQXXXXXXXXXXXX-SIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRL 460
            P+T  NF +L    +GY Y    FHR+I +F+ Q             SIYG  F DE    LKH   G LSMAN+G NTNGSQFFI       LD KH +FG V  G EV++++
Sbjct:  165 PKTAENFRQLCTHEQGYGYKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDE-NFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKM 277          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CWC27_EMENI (Peptidyl-prolyl isomerase cwc27 OS=Emericella nidulans GN=cwc27 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 56/172 (32.56%), Postives = 82/172 (47.67%), Query Frame = 2
Query:   77 TLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGH----------------VFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPAS-HLDGKHTIFGRVCRGMEVIKRLGSVQTDK---DDRPIHDVKILRTSVKD 532
            TL T+ G   + L+ K +P TCRNF +     YY  + FHR++ DFI+Q            SIY +                V  DEI   L+    G++ MA +   + GSQFFITLA     L+G+ T+FGR+  G  +   L   + ++    +RP++ VKI    V D
Sbjct:   16 TLHTTFGPLHIALFAKQTPLTCRNFLQHCMDNYYAGTIFHRVVPDFIIQGGDPTGTGSGGTSIYEYPEFEYDPDARDPNEKVVLRDEIHSRLRFNRRGLVGMAKSEDGSYGSQFFITLANTERELNGQCTLFGRL-EGDSLYNMLKIAEAERIEGTERPVYPVKITSCEVGD 186          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL4_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neurospora crassa GN=cyp-6 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQ----XXXXXXXXXXXXSIYG--------HVFEDEIKPELKHTGAGILSMAN----AGPNTN--GSQFFITLAP-ASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            V LETS G   ++L   ++P+ C NF +L +  YYN S  H I K F  Q                SI+G          F     P+LKH   G +SMA     + P+T   GSQF +TL     +LDGK  IFG+V  G +V++++     D+   P+ D++I  T + D
Sbjct:    3 VLLETSAGDIVIDLLVDYAPKMCENFLKLCKVKYYNFSPIHSIQKSFSFQTGDPLGPLSSESDGGQSIWGLLSGDPSEKTFPALFHPKLKHLERGTVSMATVPHPSDPDTRLAGSQFIVTLGDNTDYLDGKAAIFGKVVEGFDVLEKINDAIVDERGHPLVDIRIKHTVILD 174          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIB_BACSU (Peptidyl-prolyl cis-trans isomerase B OS=Bacillus subtilis GN=ppiB PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 2
Query:  110 ELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDR 490
            ELY + +P T  NF +L+  G+Y+   FHR+I  F+ Q               G+  + E +       AG LSMA+AG +T GSQFFI   P  HL+G HT+FG+V  G+E  K + +    K+ R
Sbjct:   17 ELYPEAAPGTVANFEKLANEGFYDGLTFHRVIPGFVSQGGCPHGTGTGGP---GYTIKCETEGNPHTHEAGALSMAHAGKDTGGSQFFIVHEPQPHLNGVHTVFGKVTSGLEFAKNMSNGDVMKEVR 140          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL4_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQ----XXXXXXXXXXXXSIYG-------HVFEDEIKPELKHTGAGILSMA------NAGPNTNGSQFFITLAP-ASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            V LETS+G   ++L     P+ C NF +L +  YYN S  H + K+F  Q                SI+G         F  E  P+LKH   G +SMA      +       SQF +TL     +LDGK  IFG+V  G +V++++     D   RP+ D++I  T + D
Sbjct:    3 VLLETSLGDIVIDLLVDECPKACENFLKLCKVKYYNFSPVHSVQKNFTFQTGDPLGPDSSESDGGSSIWGLLEGPPKRTFSLEPPPKLKHDERGTVSMATVPSPHDPDQRIAASQFIVTLGENLDYLDGKAVIFGKVVEGFDVLEKVNEAFIDDRGRPLKDIRIRHTVILD 173          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL4_EMENI (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emericella nidulans GN=cyp6 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 56/172 (32.56%), Postives = 83/172 (48.26%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQ----XXXXXXXXXXXXSIYG-------HVFEDEIKPELKHTGAGILSMANAGPNTNG-------SQFFITLAP-ASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            V LETS+G   ++L    SP+ C NF +L +  YYN S F+ + K+F  Q                SI+G             + P+LKH   G +SMA A P+ +        SQF +TL     +LDGK  IFG+V  G +V++++     D   RP+ D++I  T + D
Sbjct:    3 VLLETSLGDIVIDLLVDESPKACENFLKLCKVKYYNFSPFYSVQKNFSFQTGDPIGPDSPDSNGGSSIWGLLEGPSKQAVPLALPPKLKHDEKGTVSMA-AVPSPHDPDLRLVTSQFIVTLGDNLDYLDGKAVIFGKVVEGFDVLEKVNEAFIDDRGRPLKDIRIRHTVILD 173          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPIL4_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Schizosaccharomyces pombe GN=cyp6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 2
Query:   74 VTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHV-------FEDEIKPELKHTGAGILSMANAGPNTN-------GSQFFITLAP-ASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKILRTSVKD 532
            V +ET++G   ++L+ K +P+TC NF +L +  YYN   F+ I  ++  Q                +V       F+ E  P L H   G++SM+ A  ++        GSQF ITL+     LD ++ I+G+V  G + + ++     D++ +P  D++I  T + D
Sbjct:    3 VLIETTVGDLVIDLFVKEAPKTCENFLKLCKLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIKHTIILD 170          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: PPI_SYNE7 (Peptidyl-prolyl cis-trans isomerase OS=Synechococcus elongatus (strain PCC 7942) GN=rot PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 47/119 (39.50%), Postives = 61/119 (51.26%), Query Frame = 2
Query:   71 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQXXXXXXXXXXXXSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGKHTIFGR 427
            +  LET  G+  ++ +   +P T  NF +LS+ G+Y+   FHR+I  F+ Q              Y    E    P L    AG LSMA+AG NT GSQFFI   P  HLDG HT FG+
Sbjct:    3 QAILETEKGTIRLQFFDNDAPNTVANFVKLSQDGFYDGLTFHRVIPGFMSQGGCPHGTGTGGPG-YKIPCEINDNPHL----AGTLSMAHAGRNTGGSQFFICHEPQPHLDGVHTTFGQ 116          
BLAST of CF417736 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 55/177 (31.07%), Postives = 78/177 (44.07%), Query Frame = 2
Query:   92 MGSFTVELYYKHSPRTCRNFAELSRRGY-----------YNNSKFHRIIKDFIVQXXXXXXXXXXXXS-------------------------IYGHVFEDEIKPELKHTGAGILSMANAG-PNTNGSQFFITLAPASHLDGKHTIFGRVCRGMEVIKRLGSVQTDKDDRPIHDVKI 511
            +G    +L+ + +P+T  NF +L                Y  + FHR++K+F++Q            S                          YG+ FEDE   E        L MAN G PNTN SQFFIT   A HL+GKH+IFG+V  G  V++ + + + D D  P  DV+I
Sbjct:   18 IGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGN-FEDENLGEFVEPFT--LGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQVVHGKSVVRTIENCRVDSDGVPESDVRI 191          
The following BLAST results are available for this feature:
BLAST of CF417736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
CWC27_ASPFU6.214e-1733.52Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fum... [more]
PPIE_DROME1.384e-1643.86Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
CWC27_EMENI3.084e-1632.56Peptidyl-prolyl isomerase cwc27 OS=Emericella nidu... [more]
PPIL4_NEUCR4.028e-1633.14Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neur... [more]
PPIB_BACSU8.973e-1637.01Peptidyl-prolyl cis-trans isomerase B OS=Bacillus ... [more]
PPIL4_ASPOR1.531e-1532.16Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspe... [more]
PPIL4_EMENI4.453e-1532.56Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emer... [more]
PPIL4_SCHPO1.296e-1427.98Peptidyl-prolyl cis-trans isomerase cyp6 OS=Schizo... [more]
PPI_SYNE72.210e-1439.50Peptidyl-prolyl cis-trans isomerase OS=Synechococc... [more]
CYP7_YEAST7.110e-1331.07Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-666 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417736 ID=CF417736; Name=CF417736; organism=Citrus sinensis; type=EST; length=716bp
CTGAGTTTCTGGTAGTGTTGTGGTCTTGAAAGCAACAATAAAGATGCTGG
CAAGTGACGACGGTCCGCCGGAGGTCACTTTAGAAACTTCCATGGGCTCT
TTCACCGTCGAGCTTTACTACAAGCACTCTCCAAGAACTTGCAGGAACTT
TGCTGAACTATCTCGCAGAGGTTATTATAATAACAGCAAATTCCACAGAA
TTATTAAGGATTTTATAGTTCAAGGTGGAGATCCTACCGGGACTGGAAGG
GGAGGAGATTCCATATATGGCCATGTTTTCGAAGATGAAATAAAACCAGA
ATTAAAGCATACTGGAGCTGGGATCTTGTCCATGGCAAATGCTGGTCCAA
ATACAAATGGAAGCCAGTTCTTTATCACTTTGGCGCCTGCTTCACATCTG
GATGGAAAGCACACTATATTTGGAAGAGTATGCAGAGGAATGGAAGTGAT
CAAAAGGCTTGGCAGTGTCCAAACTGATAAAGATGACAGGCCCATCCATG
ACGTTAAGATACTACGGACTTCTGTTAAGGACTGATGCCATGAAACGGTT
ATGGAAACCAACGTTTCCACATGATTTTGGGTGCACTAGAGCCAGTGTTC
AAAAATCTGATTCTGAAAATTTCTAACATCTGATTTTGGATGCACTGTAC
TTTGGTATTTTATTGAAACAGAAGGCAAATATGGATCATTTGGTAATTCT
CGTCTTATTTACCATT
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